Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:80214923-80390480

31 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Mota1	1	79958656 to 80270207	311551		QTL	motor activity 1
Tssr12455	1	80218451 to 80218457	6	-	TSS region	transcription start site region 12455
Tssr7592	1	80225040 to 80225052	12	+	TSS region	transcription start site region 7592
2310015K22Rik	1	80225044 to 80228792	3748	+	lincRNA gene	RIKEN cDNA 2310015K22 gene
Gm34098	1	80236352 to 80248414	12062	+	lncRNA gene	predicted gene, 34098
Gm37932	1	80255031 to 80256197	1166	-	unclassified gene	predicted gene, 37932
Cul3	1	80264923 to 80340480	75557	-	protein coding gene	cullin 3
D1Mit134	1	80267876 to 80268019	143		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 134
Gm37902	1	80274731 to 80276413	1682	-	unclassified gene	predicted gene, 37902
Tssr12456	1	80276511 to 80276550	39	-	TSS region	transcription start site region 12456
Tssr12457	1	80277439 to 80277451	12	-	TSS region	transcription start site region 12457
Tssr12458	1	80287661 to 80287665	4	-	TSS region	transcription start site region 12458
Tssr12459	1	80289738 to 80289757	19	-	TSS region	transcription start site region 12459
Tssr12460	1	80289880 to 80289884	4	-	TSS region	transcription start site region 12460
Gm37262	1	80326177 to 80327994	1817	-	unclassified gene	predicted gene, 37262
Tssr12461	1	80329148 to 80329149	1	-	TSS region	transcription start site region 12461
Cpgi470	1	80339637 to 80341249	1612		CpG island	CpG island 470
Tssr12462	1	80340343 to 80340354	11	-	TSS region	transcription start site region 12462
Tssr12463	1	80340384 to 80340395	11	-	TSS region	transcription start site region 12463
Tssr12464	1	80340501 to 80340512	11	-	TSS region	transcription start site region 12464
Tssr12465	1	80340532 to 80340543	11	-	TSS region	transcription start site region 12465
Tssr12466	1	80340602 to 80340613	11	-	TSS region	transcription start site region 12466
Tssr12467	1	80340617 to 80340648	31	-	TSS region	transcription start site region 12467
Tssr12468	1	80340653 to 80340675	22	-	TSS region	transcription start site region 12468
Tssr12469	1	80340680 to 80340820	140	-	TSS region	transcription start site region 12469
Gm39667	1	80340913 to 80348728	7815	+	lncRNA gene	predicted gene, 39667
Gm29125	1	80382822 to 80386251	3429	+	lincRNA gene	predicted gene 29125
Gm6189	1	80383107 to 80385185	2078	-	pseudogene	predicted gene 6189
Cpgi471	1	80384268 to 80384530	262		CpG island	CpG island 471
Tssr12470	1	80385375 to 80385382	7	-	TSS region	transcription start site region 12470
Leusq2	1	126458780 to 80267876	-46190904		QTL	leucocytosis susceptibility QTL 2