Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:79858656-80370207

44 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Serpine2	1	79794317 to 79858665	64348	-	protein coding gene	serine (or cysteine) peptidase inhibitor, clade E, member 2
Cpgi468	1	79858066 to 79859290	1224		CpG island	CpG island 468
Tssr12449	1	79861294 to 79861303	9	-	TSS region	transcription start site region 12449
Gm5529	1	79922536 to 79923426	890	-	pseudogene	predicted pseudogene 5529
Tssr12450	1	79923502 to 79923508	6	-	TSS region	transcription start site region 12450
Gm28071	1	79957580 to 79958057	477	+	pseudogene	predicted gene 28071
Mota1	1	79958656 to 80270207	311551		QTL	motor activity 1
Tssr12451	1	80033653 to 80033662	9	-	TSS region	transcription start site region 12451
Gm33970	1	80037178 to 80038461	1283	-	lncRNA gene	predicted gene, 33970
Gm28058	1	80098622 to 80098885	263	+	pseudogene	predicted gene 28058
Gm23934	1	80135466 to 80135572	106	+	snRNA gene	predicted gene, 23934
Gm38339	1	80146973 to 80148801	1828	-	unclassified gene	predicted gene, 38339
Tssr12452	1	80177756 to 80177770	14	-	TSS region	transcription start site region 12452
9830004L10Rik	1	80184719 to 80192073	7354	+	lincRNA gene	RIKEN cDNA 9830004L10 gene
Fam124b	1	80198699 to 80214205	15506	-	protein coding gene	family with sequence similarity 124, member B
Cpgi469	1	80200139 to 80200295	156		CpG island	CpG island 469
Tssr12453	1	80213839 to 80213854	15	-	TSS region	transcription start site region 12453
Tssr12454	1	80213931 to 80213949	18	-	TSS region	transcription start site region 12454
Tssr12455	1	80218451 to 80218457	6	-	TSS region	transcription start site region 12455
Tssr7592	1	80225040 to 80225052	12	+	TSS region	transcription start site region 7592
2310015K22Rik	1	80225044 to 80228792	3748	+	lincRNA gene	RIKEN cDNA 2310015K22 gene
Gm34098	1	80236352 to 80248414	12062	+	lncRNA gene	predicted gene, 34098
Gm37932	1	80255031 to 80256197	1166	-	unclassified gene	predicted gene, 37932
Cul3	1	80264923 to 80340480	75557	-	protein coding gene	cullin 3
D1Mit134	1	80267876 to 80268019	143		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 134
Gm37902	1	80274731 to 80276413	1682	-	unclassified gene	predicted gene, 37902
Tssr12456	1	80276511 to 80276550	39	-	TSS region	transcription start site region 12456
Tssr12457	1	80277439 to 80277451	12	-	TSS region	transcription start site region 12457
Tssr12458	1	80287661 to 80287665	4	-	TSS region	transcription start site region 12458
Tssr12459	1	80289738 to 80289757	19	-	TSS region	transcription start site region 12459
Tssr12460	1	80289880 to 80289884	4	-	TSS region	transcription start site region 12460
Gm37262	1	80326177 to 80327994	1817	-	unclassified gene	predicted gene, 37262
Tssr12461	1	80329148 to 80329149	1	-	TSS region	transcription start site region 12461
Cpgi470	1	80339637 to 80341249	1612		CpG island	CpG island 470
Tssr12462	1	80340343 to 80340354	11	-	TSS region	transcription start site region 12462
Tssr12463	1	80340384 to 80340395	11	-	TSS region	transcription start site region 12463
Tssr12464	1	80340501 to 80340512	11	-	TSS region	transcription start site region 12464
Tssr12465	1	80340532 to 80340543	11	-	TSS region	transcription start site region 12465
Tssr12466	1	80340602 to 80340613	11	-	TSS region	transcription start site region 12466
Tssr12467	1	80340617 to 80340648	31	-	TSS region	transcription start site region 12467
Tssr12468	1	80340653 to 80340675	22	-	TSS region	transcription start site region 12468
Tssr12469	1	80340680 to 80340820	140	-	TSS region	transcription start site region 12469
Gm39667	1	80340913 to 80348728	7815	+	lncRNA gene	predicted gene, 39667
Leusq2	1	126458780 to 80267876	-46190904		QTL	leucocytosis susceptibility QTL 2