Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:78623084-79313100

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi461 1 78657494 to 78658629 1135 CpG island CpG island 461
Acsl3 1 78657825 to 78707743 49918 + protein coding gene acyl-CoA synthetase long-chain family member 3
Utp14b 1 78657825 to 78667601 9776 + protein coding gene UTP14B small subunit processome component
Tssr7581 1 78657856 to 78657868 12 + TSS region transcription start site region 7581
Tssr7582 1 78657874 to 78657889 15 + TSS region transcription start site region 7582
Tssr12428 1 78658273 to 78658282 9 - TSS region transcription start site region 12428
Tssr12429 1 78658290 to 78658309 19 - TSS region transcription start site region 12429
Tssr7583 1 78669511 to 78669530 19 + TSS region transcription start site region 7583
Tssr7584 1 78674203 to 78674208 5 + TSS region transcription start site region 7584
Tssr12430 1 78680686 to 78680720 34 - TSS region transcription start site region 12430
Gm38631 1 78719984 to 78746154 26170 + lncRNA gene predicted gene, 38631
Gm33693 1 78726659 to 78740969 14310 - lncRNA gene predicted gene, 33693
Tssr7585 1 78738126 to 78738158 32 + TSS region transcription start site region 7585
Gm6159 1 78783136 to 78784859 1723 - pseudogene predicted gene 6159
Gm29536 1 78791623 to 79224511 432888 - lincRNA gene predicted gene 29536
Tssr7586 1 78816909 to 78816913 4 + TSS region transcription start site region 7586
Kcne4 1 78816949 to 78820025 3076 + protein coding gene potassium voltage-gated channel, Isk-related subfamily, gene 4
Gm29187 1 78821258 to 78822652 1394 + lincRNA gene predicted gene 29187
Gm5830 1 78967637 to 78968079 442 - pseudogene predicted pseudogene 5830
Tssr12431 1 78968084 to 78968100 16 - TSS region transcription start site region 12431
Tssr7587 1 79197747 to 79197757 10 + TSS region transcription start site region 7587