Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:78557825-78767601

17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm39665	1	78560045 to 78588394	28349	-	lncRNA gene	predicted gene, 39665
5730419F03Rik	1	78595031 to 78609508	14477	-	lincRNA gene	RIKEN cDNA 5730419F03 gene
Tssr7580	1	78602342 to 78602364	22	+	TSS region	transcription start site region 7580
Gm29611	1	78615467 to 78620165	4698	+	lincRNA gene	predicted gene 29611
Cpgi461	1	78657494 to 78658629	1135		CpG island	CpG island 461
Acsl3	1	78657825 to 78707743	49918	+	protein coding gene	acyl-CoA synthetase long-chain family member 3
Utp14b	1	78657825 to 78667601	9776	+	protein coding gene	UTP14B small subunit processome component
Tssr7581	1	78657856 to 78657868	12	+	TSS region	transcription start site region 7581
Tssr7582	1	78657874 to 78657889	15	+	TSS region	transcription start site region 7582
Tssr12428	1	78658273 to 78658282	9	-	TSS region	transcription start site region 12428
Tssr12429	1	78658290 to 78658309	19	-	TSS region	transcription start site region 12429
Tssr7583	1	78669511 to 78669530	19	+	TSS region	transcription start site region 7583
Tssr7584	1	78674203 to 78674208	5	+	TSS region	transcription start site region 7584
Tssr12430	1	78680686 to 78680720	34	-	TSS region	transcription start site region 12430
Gm38631	1	78719984 to 78746154	26170	+	lncRNA gene	predicted gene, 38631
Gm33693	1	78726659 to 78740969	14310	-	lncRNA gene	predicted gene, 33693
Tssr7585	1	78738126 to 78738158	32	+	TSS region	transcription start site region 7585