Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:78254073-78574699

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
n-TPagg1 1 78297795 to 78297866 71 + tRNA gene nuclear encoded tRNA proline 1 (anticodon AGG)
Tssr7567 1 78309555 to 78309568 13 + TSS region transcription start site region 7567
Cpgi457 1 78309968 to 78311013 1045 CpG island CpG island 457
Tssr7568 1 78310295 to 78310375 80 + TSS region transcription start site region 7568
Sgpp2 1 78310345 to 78420289 109944 + protein coding gene sphingosine-1-phosphate phosphotase 2
Tssr7569 1 78310377 to 78310386 9 + TSS region transcription start site region 7569
Tssr7570 1 78310391 to 78310400 9 + TSS region transcription start site region 7570
Tssr12424 1 78311976 to 78311979 3 - TSS region transcription start site region 12424
Gm28410 1 78325628 to 78340106 14478 - antisense lncRNA gene predicted gene 28410
Gm37884 1 78375614 to 78376431 817 + unclassified gene predicted gene, 37884
Gm19072 1 78414073 to 78414699 626 - pseudogene predicted gene, 19072
Farsb 1 78417975 to 78488897 70922 - protein coding gene phenylalanyl-tRNA synthetase, beta subunit
Tssr12425 1 78422694 to 78422711 17 - TSS region transcription start site region 12425
Gm28995 1 78433352 to 78433612 260 + pseudogene predicted gene 28995
4833412K13Rik 1 78465448 to 78466926 1478 - unclassified gene RIKEN cDNA 4833412K13 gene
Cpgi458 1 78488342 to 78489004 662 CpG island CpG island 458
Tssr12426 1 78488849 to 78488866 17 - TSS region transcription start site region 12426
BC035947 1 78497026 to 78512158 15132 - protein coding gene cDNA sequence BC035947
Mogat1 1 78510991 to 78538173 27182 + protein coding gene monoacylglycerol O-acyltransferase 1
Cpgi459 1 78511712 to 78512159 447 CpG island CpG island 459
Tssr7571 1 78511743 to 78511762 19 + TSS region transcription start site region 7571
Tssr7572 1 78511805 to 78511816 11 + TSS region transcription start site region 7572
Tssr7573 1 78511836 to 78511847 11 + TSS region transcription start site region 7573
Tssr7574 1 78511865 to 78511896 31 + TSS region transcription start site region 7574
Tssr7575 1 78511904 to 78511921 17 + TSS region transcription start site region 7575
Tssr7576 1 78526569 to 78526602 33 + TSS region transcription start site region 7576
Tssr12427 1 78537498 to 78537507 9 - TSS region transcription start site region 12427
Cpgi460 1 78537571 to 78537914 343 CpG island CpG island 460
Tssr7577 1 78537938 to 78537941 3 + TSS region transcription start site region 7577
Tssr7578 1 78537962 to 78537972 10 + TSS region transcription start site region 7578
Tssr7579 1 78537979 to 78537992 13 + TSS region transcription start site region 7579
Gm39665 1 78560045 to 78588394 28349 - lncRNA gene predicted gene, 39665