Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:75712756-77542905

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
dde 1 70367239 to 76794683 6427444 heritable phenotypic marker disproportionate dwarf and eye defect
D1Mit331 1 75833834 to 75833993 159 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 331
Tssr127 1 75885426 to 75885432 6 + TSS region transcription start site region 127
D1Mit284 1 75915229 to 75915317 88 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 284
Gm32622 1 75936719 to 76094342 157623 + lncRNA gene predicted gene, 32622
Gm29065 1 76016658 to 76018756 2098 - lincRNA gene predicted gene 29065
Gm32737 1 76094981 to 76106216 11235 + lncRNA gene predicted gene, 32737
Gm29068 1 76110181 to 76110580 399 - pseudogene predicted gene 29068
D1Mit333 1 76366572 to 76366673 101 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 333
D1Mit484 1 76386343 to 76386457 114 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 484
Gm29069 1 76420692 to 76528422 107730 + lincRNA gene predicted gene 29069
D1Mit483.1 1 76454674 to 76454789 115 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 483.1
D1Mit483 1 76454848 to 76454963 115 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 483
Gm17751 1 76489133 to 76502028 12895 + lincRNA gene predicted gene, 17751
Mir6343 1 76509560 to 76509643 83 + miRNA gene microRNA 6343
Tssr128 1 76596651 to 76596652 1 + TSS region transcription start site region 128
D1Mit133 1 76623936 to 76624172 236 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 133
D1Mit79 1 76627756 to 76627905 149 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 79
D1Mit162 1 76794554 to 76794683 129 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 162
D1Mit436 1 76823488 to 76823607 119 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 436
Gm816 1 76890472 to 77027792 137320 - lincRNA gene predicted gene 816
Tssr7561 1 77050293 to 77050294 1 + TSS region transcription start site region 7561
Gm2060 1 77050301 to 77050884 583 + pseudogene predicted gene 2060
Tssr7562 1 77065866 to 77065878 12 + TSS region transcription start site region 7562
Tfdp1-ps 1 77065870 to 77067692 1822 + pseudogene transcription factor Dp 1, pseudogene
Gm38265 1 77143227 to 77146992 3765 - unclassified gene predicted gene, 38265
Gm25974 1 77144753 to 77144846 93 + rRNA gene predicted gene, 25974
D1Mit132 1 77146478 to 77146623 145 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 132
Epha4 1 77367185 to 77515088 147903 - protein coding gene Eph receptor A4
D1Mit332 1 77403501 to 77403621 120 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 332
Tssr12416 1 77457264 to 77457272 8 - TSS region transcription start site region 12416
Tssr12417 1 77488697 to 77488701 4 - TSS region transcription start site region 12417
Mir6352 1 77496653 to 77496768 115 - miRNA gene microRNA 6352
Cpgi447 1 77513411 to 77513914 503 CpG island CpG island 447
Cpgi448 1 77514071 to 77515864 1793 CpG island CpG island 448
Tssr12418 1 77515048 to 77515102 54 - TSS region transcription start site region 12418
Gm28386 1 77515280 to 77517128 1848 + lincRNA gene predicted gene 28386
Cpgi449 1 77516080 to 77516903 823 CpG island CpG island 449
Gm32793 1 77522190 to 77602382 80192 + lncRNA gene predicted gene, 32793
Tssr7563 1 77522368 to 77522386 18 + TSS region transcription start site region 7563
Mord2 1 110608345 to 77146478 -33461867 QTL modifier of retinal degeneration 2