Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:75253203-75423349

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ptprn 1 75247035 to 75264497 17462 - protein coding gene protein tyrosine phosphatase, receptor type, N
Gm28294 1 75252322 to 75257427 5105 + antisense lncRNA gene predicted gene 28294
Tssr12380 1 75255849 to 75255867 18 - TSS region transcription start site region 12380
Tssr12381 1 75256823 to 75256847 24 - TSS region transcription start site region 12381
Cpgi420 1 75263495 to 75264296 801 CpG island CpG island 420
Tssr12382 1 75264134 to 75264194 60 - TSS region transcription start site region 12382
Tssr12383 1 75264195 to 75264219 24 - TSS region transcription start site region 12383
Tssr12384 1 75264239 to 75264240 1 - TSS region transcription start site region 12384
Tssr12385 1 75264266 to 75264275 9 - TSS region transcription start site region 12385
Tssr12386 1 75264279 to 75264288 9 - TSS region transcription start site region 12386
Tssr12387 1 75264676 to 75264693 17 - TSS region transcription start site region 12387
Resp18 1 75272199 to 75278415 6216 - protein coding gene regulated endocrine-specific protein 18
Gm28902 1 75272605 to 75275652 3047 + antisense lncRNA gene predicted gene 28902
Cpgi421 1 75278191 to 75278364 173 CpG island CpG island 421
Tssr12388 1 75278345 to 75278440 95 - TSS region transcription start site region 12388
Tssr12389 1 75278441 to 75278455 14 - TSS region transcription start site region 12389
D1Mcg7 1 75305074 to 75305285 211 DNA segment DNA segment, Chr 1, McGill University 7
Dnpep 1 75308565 to 75317654 9089 - protein coding gene aspartyl aminopeptidase
Cpgi422 1 75316504 to 75318193 1689 CpG island CpG island 422
Tssr12390 1 75316914 to 75316937 23 - TSS region transcription start site region 12390
Tssr12391 1 75316946 to 75316982 36 - TSS region transcription start site region 12391
Tssr12392 1 75316998 to 75317025 27 - TSS region transcription start site region 12392
Tssr12393 1 75317163 to 75317177 14 - TSS region transcription start site region 12393
Tssr12394 1 75317299 to 75317342 43 - TSS region transcription start site region 12394
Tssr12395 1 75317360 to 75317491 131 - TSS region transcription start site region 12395
Tssr12396 1 75317536 to 75317545 9 - TSS region transcription start site region 12396
Tssr12397 1 75317590 to 75317612 22 - TSS region transcription start site region 12397
D1Mit61 1 75338203 to 75338349 146 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 61
Cpgi423 1 75360175 to 75361340 1165 CpG island CpG island 423
Tssr7513 1 75360222 to 75360249 27 + TSS region transcription start site region 7513
Tssr7514 1 75360321 to 75360338 17 + TSS region transcription start site region 7514
Des 1 75360329 to 75368579 8250 + protein coding gene desmin
Tssr7515 1 75360342 to 75360353 11 + TSS region transcription start site region 7515
Tssr7516 1 75362015 to 75362044 29 + TSS region transcription start site region 7516
Tssr7517 1 75362049 to 75362064 15 + TSS region transcription start site region 7517
Tssr12398 1 75362182 to 75362223 41 - TSS region transcription start site region 12398
Tssr12399 1 75366811 to 75366847 36 - TSS region transcription start site region 12399
Tssr7518 1 75367127 to 75367166 39 + TSS region transcription start site region 7518
Tssr7519 1 75367642 to 75367689 47 + TSS region transcription start site region 7519
Gm15179 1 75368212 to 75375012 6800 - antisense lncRNA gene predicted gene 15179
Cpgi424 1 75369517 to 75369887 370 CpG island CpG island 424
Tssr12400 1 75370448 to 75370485 37 - TSS region transcription start site region 12400
Tssr12401 1 75375002 to 75375031 29 - TSS region transcription start site region 12401
Cpgi425 1 75375224 to 75375917 693 CpG island CpG island 425
Tssr7520 1 75375271 to 75375325 54 + TSS region transcription start site region 7520
Speg 1 75375297 to 75432320 57023 + protein coding gene SPEG complex locus
Tssr7521 1 75375328 to 75375339 11 + TSS region transcription start site region 7521
Cpgi426 1 75381618 to 75382707 1089 CpG island CpG island 426
Tssr7522 1 75381631 to 75381650 19 + TSS region transcription start site region 7522
Tssr7523 1 75381651 to 75381663 12 + TSS region transcription start site region 7523
Tssr7524 1 75382119 to 75382149 30 + TSS region transcription start site region 7524
Tssr7525 1 75383585 to 75383588 3 + TSS region transcription start site region 7525
Tssr7526 1 75384669 to 75384682 13 + TSS region transcription start site region 7526
Cpgi427 1 75384673 to 75385402 729 CpG island CpG island 427
Tssr7527 1 75385544 to 75385601 57 + TSS region transcription start site region 7527
Cpgi428 1 75387605 to 75389255 1650 CpG island CpG island 428
Gm15178 1 75392131 to 75396363 4232 - antisense lncRNA gene predicted gene 15178
Tssr7528 1 75400070 to 75400163 93 + TSS region transcription start site region 7528
Tssr7529 1 75400174 to 75400185 11 + TSS region transcription start site region 7529
Tssr124 1 75400972 to 75401020 48 + TSS region transcription start site region 124
Cpgi429 1 75421895 to 75423628 1733 CpG island CpG island 429