Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:75184279-75344288

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm29253 1 75171731 to 75185146 13415 - unclassified non-coding RNA gene predicted gene 29253
Atg9a 1 75180861 to 75192010 11149 - protein coding gene autophagy related 9A
Tssr12362 1 75190350 to 75190381 31 - TSS region transcription start site region 12362
Cpgi414 1 75191406 to 75192783 1377 CpG island CpG island 414
Tssr12363 1 75191682 to 75191735 53 - TSS region transcription start site region 12363
Tssr12364 1 75191934 to 75191997 63 - TSS region transcription start site region 12364
Tssr12365 1 75192004 to 75192016 12 - TSS region transcription start site region 12365
Tssr7498 1 75192143 to 75192230 87 + TSS region transcription start site region 7498
Ankzf1 1 75192160 to 75199387 7227 + protein coding gene ankyrin repeat and zinc finger domain containing 1
Tssr12366 1 75192631 to 75192682 51 - TSS region transcription start site region 12366
Glb1l 1 75198236 to 75210813 12577 - protein coding gene galactosidase, beta 1-like
Cpgi415 1 75209151 to 75209591 440 CpG island CpG island 415
Tssr12367 1 75209429 to 75209476 47 - TSS region transcription start site region 12367
Gm27943 1 75209613 to 75209728 115 - miRNA gene predicted gene, 27943
Cpgi416 1 75210685 to 75211335 650 CpG island CpG island 416
Tssr123 1 75210717 to 75210730 13 - TSS region transcription start site region 123
Tssr12368 1 75210732 to 75210807 75 - TSS region transcription start site region 12368
Tssr7499 1 75210832 to 75210910 78 + TSS region transcription start site region 7499
Stk16 1 75210838 to 75215606 4768 + protein coding gene serine/threonine kinase 16
Tuba4a 1 75214972 to 75219860 4888 - protein coding gene tubulin, alpha 4A
Tssr12369 1 75216438 to 75216450 12 - TSS region transcription start site region 12369
Tssr12370 1 75216516 to 75216546 30 - TSS region transcription start site region 12370
Tssr12371 1 75216949 to 75216971 22 - TSS region transcription start site region 12371
Tssr12372 1 75217294 to 75217304 10 - TSS region transcription start site region 12372
Tssr12373 1 75218483 to 75218494 11 - TSS region transcription start site region 12373
Cpgi417 1 75218497 to 75220225 1728 CpG island CpG island 417
Tssr12374 1 75219245 to 75219262 17 - TSS region transcription start site region 12374
Tssr12375 1 75219853 to 75219891 38 - TSS region transcription start site region 12375
Tssr12376 1 75219911 to 75219922 11 - TSS region transcription start site region 12376
A630095N17Rik 1 75220095 to 75232102 12007 - protein coding gene RIKEN cDNA A630095N17 gene
Cpgi418 1 75236176 to 75237113 937 CpG island CpG island 418
Tssr12377 1 75236261 to 75236283 22 - TSS region transcription start site region 12377
Tssr12378 1 75236325 to 75236348 23 - TSS region transcription start site region 12378
Tssr7500 1 75236400 to 75236429 29 + TSS region transcription start site region 7500
Dnajb2 1 75236406 to 75245692 9286 + protein coding gene DnaJ heat shock protein family (Hsp40) member B2
Tssr7501 1 75236439 to 75236469 30 + TSS region transcription start site region 7501
Tssr7502 1 75236471 to 75236492 21 + TSS region transcription start site region 7502
Tssr7503 1 75236498 to 75236521 23 + TSS region transcription start site region 7503
Tssr7504 1 75236527 to 75236548 21 + TSS region transcription start site region 7504
Tssr7505 1 75236577 to 75236588 11 + TSS region transcription start site region 7505
Tssr7506 1 75236616 to 75236627 11 + TSS region transcription start site region 7506
Tssr7507 1 75236659 to 75236665 6 + TSS region transcription start site region 7507
Tssr7508 1 75236753 to 75236761 8 + TSS region transcription start site region 7508
Tssr7509 1 75236765 to 75236803 38 + TSS region transcription start site region 7509
Tssr12379 1 75236863 to 75236882 19 - TSS region transcription start site region 12379
Tssr7510 1 75236964 to 75236972 8 + TSS region transcription start site region 7510
Tssr7511 1 75236973 to 75236991 18 + TSS region transcription start site region 7511
Ptprn 1 75247035 to 75264497 17462 - protein coding gene protein tyrosine phosphatase, receptor type, N
Tssr7512 1 75247189 to 75247197 8 + TSS region transcription start site region 7512
Cpgi419 1 75251616 to 75252029 413 CpG island CpG island 419
Gm28294 1 75252322 to 75257427 5105 + antisense lncRNA gene predicted gene 28294
Tssr12380 1 75255849 to 75255867 18 - TSS region transcription start site region 12380
Tssr12381 1 75256823 to 75256847 24 - TSS region transcription start site region 12381
Cpgi420 1 75263495 to 75264296 801 CpG island CpG island 420
Tssr12382 1 75264134 to 75264194 60 - TSS region transcription start site region 12382
Tssr12383 1 75264195 to 75264219 24 - TSS region transcription start site region 12383
Tssr12384 1 75264239 to 75264240 1 - TSS region transcription start site region 12384
Tssr12385 1 75264266 to 75264275 9 - TSS region transcription start site region 12385
Tssr12386 1 75264279 to 75264288 9 - TSS region transcription start site region 12386
Tssr12387 1 75264676 to 75264693 17 - TSS region transcription start site region 12387
Resp18 1 75272199 to 75278415 6216 - protein coding gene regulated endocrine-specific protein 18
Gm28902 1 75272605 to 75275652 3047 + antisense lncRNA gene predicted gene 28902
Cpgi421 1 75278191 to 75278364 173 CpG island CpG island 421
Tssr12388 1 75278345 to 75278440 95 - TSS region transcription start site region 12388
Tssr12389 1 75278441 to 75278455 14 - TSS region transcription start site region 12389
D1Mcg7 1 75305074 to 75305285 211 DNA segment DNA segment, Chr 1, McGill University 7
Dnpep 1 75308565 to 75317654 9089 - protein coding gene aspartyl aminopeptidase
Cpgi422 1 75316504 to 75318193 1689 CpG island CpG island 422
Tssr12390 1 75316914 to 75316937 23 - TSS region transcription start site region 12390
Tssr12391 1 75316946 to 75316982 36 - TSS region transcription start site region 12391
Tssr12392 1 75316998 to 75317025 27 - TSS region transcription start site region 12392
Tssr12393 1 75317163 to 75317177 14 - TSS region transcription start site region 12393
Tssr12394 1 75317299 to 75317342 43 - TSS region transcription start site region 12394
Tssr12395 1 75317360 to 75317491 131 - TSS region transcription start site region 12395
Tssr12396 1 75317536 to 75317545 9 - TSS region transcription start site region 12396
Tssr12397 1 75317590 to 75317612 22 - TSS region transcription start site region 12397
D1Mit61 1 75338203 to 75338349 146 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 61