Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 1:75121717-75230392

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84 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nhej1 1 74967346 to 75125226 157880 - protein coding gene non-homologous end joining factor 1
Cpgi409 1 75124540 to 75125370 830 CpG island CpG island 409
Tssr12335 1 75124936 to 75124950 14 - TSS region transcription start site region 12335
Tssr12336 1 75125182 to 75125210 28 - TSS region transcription start site region 12336
Tssr12337 1 75125228 to 75125255 27 - TSS region transcription start site region 12337
Slc23a3 1 75125541 to 75133890 8349 - protein coding gene solute carrier family 23 (nucleobase transporters), member 3
Tssr7483 1 75128550 to 75128552 2 + TSS region transcription start site region 7483
Tssr12338 1 75128577 to 75128600 23 - TSS region transcription start site region 12338
Tssr12339 1 75128601 to 75128621 20 - TSS region transcription start site region 12339
Tssr12340 1 75128643 to 75128655 12 - TSS region transcription start site region 12340
Tssr12341 1 75133478 to 75133483 5 - TSS region transcription start site region 12341
Tssr12342 1 75133507 to 75133516 9 - TSS region transcription start site region 12342
Tssr12343 1 75133529 to 75133559 30 - TSS region transcription start site region 12343
Tssr12344 1 75133573 to 75133578 5 - TSS region transcription start site region 12344
Tssr12345 1 75133866 to 75133888 22 - TSS region transcription start site region 12345
Tssr12346 1 75133893 to 75133913 20 - TSS region transcription start site region 12346
Cnppd1 1 75135762 to 75142744 6982 - protein coding gene cyclin Pas1/PHO80 domain containing 1
Tssr12347 1 75136588 to 75136601 13 - TSS region transcription start site region 12347
Tssr12348 1 75137404 to 75137424 20 - TSS region transcription start site region 12348
Tssr12349 1 75139396 to 75139400 4 - TSS region transcription start site region 12349
Cpgi410 1 75141307 to 75142067 760 CpG island CpG island 410
Tssr12350 1 75141509 to 75141515 6 - TSS region transcription start site region 12350
Tssr12351 1 75141518 to 75141530 12 - TSS region transcription start site region 12351
Tssr12352 1 75141531 to 75141544 13 - TSS region transcription start site region 12352
Tssr12353 1 75141572 to 75141606 34 - TSS region transcription start site region 12353
Tssr12354 1 75141626 to 75141648 22 - TSS region transcription start site region 12354
Tssr7484 1 75141633 to 75141705 72 + TSS region transcription start site region 7484
Tssr12355 1 75141729 to 75141743 14 - TSS region transcription start site region 12355
Tssr7485 1 75141787 to 75141798 11 + TSS region transcription start site region 7485
Tssr12356 1 75141792 to 75141803 11 - TSS region transcription start site region 12356
Cpgi411 1 75142235 to 75143512 1277 CpG island CpG island 411
Tssr12357 1 75142324 to 75142354 30 - TSS region transcription start site region 12357
Tssr12358 1 75142360 to 75142424 64 - TSS region transcription start site region 12358
Tssr7486 1 75142433 to 75142483 50 + TSS region transcription start site region 7486
Tssr7487 1 75142502 to 75142519 17 + TSS region transcription start site region 7487
Tssr12359 1 75142634 to 75142725 91 - TSS region transcription start site region 12359
Tssr7488 1 75142718 to 75142742 24 + TSS region transcription start site region 7488
Tssr7489 1 75142762 to 75142773 11 + TSS region transcription start site region 7489
Tssr7490 1 75142775 to 75142797 22 + TSS region transcription start site region 7490
Retreg2 1 75142786 to 75147909 5123 + protein coding gene reticulophagy regulator family member 2
Tssr7491 1 75142813 to 75142824 11 + TSS region transcription start site region 7491
Tssr7492 1 75142828 to 75142837 9 + TSS region transcription start site region 7492
Tssr7493 1 75143243 to 75143271 28 + TSS region transcription start site region 7493
Tssr7494 1 75147298 to 75147318 20 + TSS region transcription start site region 7494
Cpgi412 1 75168459 to 75169327 868 CpG island CpG island 412
Tssr7495 1 75168631 to 75168656 25 + TSS region transcription start site region 7495
Zfand2b 1 75168646 to 75171626 2980 + protein coding gene zinc finger, AN1 type domain 2B
Tssr7496 1 75168660 to 75168683 23 + TSS region transcription start site region 7496
Tssr7497 1 75168746 to 75168772 26 + TSS region transcription start site region 7497
Abcb6 1 75171717 to 75180392 8675 - protein coding gene ATP-binding cassette, sub-family B (MDR/TAP), member 6
Gm29253 1 75171731 to 75185146 13415 - lncRNA gene predicted gene 29253
Cpgi413 1 75179697 to 75180570 873 CpG island CpG island 413
Tssr12360 1 75180226 to 75180309 83 - TSS region transcription start site region 12360
Tssr12361 1 75180349 to 75180407 58 - TSS region transcription start site region 12361
Atg9a 1 75180861 to 75192010 11149 - protein coding gene autophagy related 9A
Tssr12362 1 75190350 to 75190381 31 - TSS region transcription start site region 12362
Cpgi414 1 75191406 to 75192783 1377 CpG island CpG island 414
Tssr12363 1 75191682 to 75191735 53 - TSS region transcription start site region 12363
Tssr12364 1 75191934 to 75191997 63 - TSS region transcription start site region 12364
Tssr12365 1 75192004 to 75192016 12 - TSS region transcription start site region 12365
Tssr7498 1 75192143 to 75192230 87 + TSS region transcription start site region 7498
Ankzf1 1 75192160 to 75199387 7227 + protein coding gene ankyrin repeat and zinc finger domain containing 1
Tssr12366 1 75192631 to 75192682 51 - TSS region transcription start site region 12366
Glb1l 1 75198236 to 75210813 12577 - protein coding gene galactosidase, beta 1-like
Cpgi415 1 75209151 to 75209591 440 CpG island CpG island 415
Tssr12367 1 75209429 to 75209476 47 - TSS region transcription start site region 12367
Gm27943 1 75209613 to 75209728 115 - miRNA gene predicted gene, 27943
Cpgi416 1 75210685 to 75211335 650 CpG island CpG island 416
Tssr123 1 75210717 to 75210730 13 - TSS region transcription start site region 123
Tssr12368 1 75210732 to 75210807 75 - TSS region transcription start site region 12368
Tssr7499 1 75210832 to 75210910 78 + TSS region transcription start site region 7499
Stk16 1 75210838 to 75215606 4768 + protein coding gene serine/threonine kinase 16
Tuba4a 1 75214228 to 75219865 5637 - protein coding gene tubulin, alpha 4A
Tssr12369 1 75216438 to 75216450 12 - TSS region transcription start site region 12369
Tssr12370 1 75216516 to 75216546 30 - TSS region transcription start site region 12370
Tssr12371 1 75216949 to 75216971 22 - TSS region transcription start site region 12371
Tssr12372 1 75217294 to 75217304 10 - TSS region transcription start site region 12372
Tssr12373 1 75218483 to 75218494 11 - TSS region transcription start site region 12373
Cpgi417 1 75218497 to 75220225 1728 CpG island CpG island 417
Tssr12374 1 75219245 to 75219262 17 - TSS region transcription start site region 12374
Tssr12375 1 75219853 to 75219891 38 - TSS region transcription start site region 12375
Tssr12376 1 75219911 to 75219922 11 - TSS region transcription start site region 12376
A630095N17Rik 1 75220095 to 75232093 11998 - protein coding gene RIKEN cDNA A630095N17 gene
Gm50472 1 75229552 to 75229779 227 + pseudogene predicted gene, 50472