Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Cfap65 | 1 | 33528 | - | protein coding gene | cilia and flagella associated protein 65 | |
Gm15841 | 1 | 5282 | + | antisense lncRNA gene | predicted gene 15841 | |
Tssr12330 | 1 | 4 | - | TSS region | transcription start site region 12330 | |
Tssr12331 | 1 | 64 | - | TSS region | transcription start site region 12331 | |
Ihh | 1 | 6357 | - | protein coding gene | Indian hedgehog | |
Cpgi407 | 1 | 765 | CpG island | CpG island 407 | ||
Cpgi408 | 1 | 2670 | CpG island | CpG island 408 | ||
Tssr12332 | 1 | 12 | - | TSS region | transcription start site region 12332 | |
Tssr12333 | 1 | 16 | - | TSS region | transcription start site region 12333 | |
Skl1 | 1 | 103 | QTL | skeletal size (tail length) 1 | ||
Skull1 | 1 | 103 | QTL | skull morphology 1 | ||
D1Mit7 | 1 | 103 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 7 | ||
Egrm1 | 1 | 103 | QTL | early growth rate, maternal effect 1 | ||
Gm37744 | 1 | 1589 | + | unclassified gene | predicted gene, 37744 | |
Nhej1 | 1 | 157880 | - | protein coding gene | nonhomologous end-joining factor 1 | |
Tssr12334 | 1 | 14 | - | TSS region | transcription start site region 12334 | |
D1Mit252 | 1 | 148 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 252 | ||
D1Mit252.1 | 1 | 112 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 252.1 | ||
Tssr7482 | 1 | 5 | + | TSS region | transcription start site region 7482 | |
D1Mit23 | 1 | 131 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 23 | ||
Cpgi409 | 1 | 830 | CpG island | CpG island 409 | ||
Tssr12335 | 1 | 14 | - | TSS region | transcription start site region 12335 | |
Tssr12336 | 1 | 28 | - | TSS region | transcription start site region 12336 | |
Tssr12337 | 1 | 27 | - | TSS region | transcription start site region 12337 | |
Slc23a3 | 1 | 8349 | - | protein coding gene | solute carrier family 23 (nucleobase transporters), member 3 | |
Tssr7483 | 1 | 2 | + | TSS region | transcription start site region 7483 | |
Tssr12338 | 1 | 23 | - | TSS region | transcription start site region 12338 | |
Tssr12339 | 1 | 20 | - | TSS region | transcription start site region 12339 | |
Tssr12340 | 1 | 12 | - | TSS region | transcription start site region 12340 | |
Tssr12341 | 1 | 5 | - | TSS region | transcription start site region 12341 | |
Tssr12342 | 1 | 9 | - | TSS region | transcription start site region 12342 | |
Tssr12343 | 1 | 30 | - | TSS region | transcription start site region 12343 | |
Tssr12344 | 1 | 5 | - | TSS region | transcription start site region 12344 | |
Tssr12345 | 1 | 22 | - | TSS region | transcription start site region 12345 | |
Tssr12346 | 1 | 20 | - | TSS region | transcription start site region 12346 | |
Cnppd1 | 1 | 7518 | - | protein coding gene | cyclin Pas1/PHO80 domain containing 1 | |
Tssr12347 | 1 | 13 | - | TSS region | transcription start site region 12347 | |
Tssr12348 | 1 | 20 | - | TSS region | transcription start site region 12348 | |
Tssr12349 | 1 | 4 | - | TSS region | transcription start site region 12349 | |
Cpgi410 | 1 | 760 | CpG island | CpG island 410 | ||
Tssr12350 | 1 | 6 | - | TSS region | transcription start site region 12350 | |
Tssr12351 | 1 | 12 | - | TSS region | transcription start site region 12351 | |
Tssr12352 | 1 | 13 | - | TSS region | transcription start site region 12352 | |
Tssr12353 | 1 | 34 | - | TSS region | transcription start site region 12353 | |
Tssr12354 | 1 | 22 | - | TSS region | transcription start site region 12354 | |
Tssr7484 | 1 | 72 | + | TSS region | transcription start site region 7484 | |
Tssr12355 | 1 | 14 | - | TSS region | transcription start site region 12355 | |
Tssr7485 | 1 | 11 | + | TSS region | transcription start site region 7485 | |
Tssr12356 | 1 | 11 | - | TSS region | transcription start site region 12356 | |
Cpgi411 | 1 | 1277 | CpG island | CpG island 411 | ||
Tssr12357 | 1 | 30 | - | TSS region | transcription start site region 12357 | |
Tssr12358 | 1 | 64 | - | TSS region | transcription start site region 12358 | |
Tssr7486 | 1 | 50 | + | TSS region | transcription start site region 7486 | |
Tssr7487 | 1 | 17 | + | TSS region | transcription start site region 7487 | |
Tssr12359 | 1 | 91 | - | TSS region | transcription start site region 12359 | |
Tssr7488 | 1 | 24 | + | TSS region | transcription start site region 7488 | |
Tssr7489 | 1 | 11 | + | TSS region | transcription start site region 7489 | |
Tssr7490 | 1 | 22 | + | TSS region | transcription start site region 7490 | |
Retreg2 | 1 | 5123 | + | protein coding gene | reticulophagy regulator family member 2 | |
Tssr7491 | 1 | 11 | + | TSS region | transcription start site region 7491 | |
Tssr7492 | 1 | 9 | + | TSS region | transcription start site region 7492 | |
Tssr7493 | 1 | 28 | + | TSS region | transcription start site region 7493 | |
Tssr7494 | 1 | 20 | + | TSS region | transcription start site region 7494 | |
Cpgi412 | 1 | 868 | CpG island | CpG island 412 | ||
Tssr7495 | 1 | 25 | + | TSS region | transcription start site region 7495 | |
Zfand2b | 1 | 2980 | + | protein coding gene | zinc finger, AN1 type domain 2B | |
Tssr7496 | 1 | 23 | + | TSS region | transcription start site region 7496 | |
Tssr7497 | 1 | 26 | + | TSS region | transcription start site region 7497 | |
Abcb6 | 1 | 8675 | - | protein coding gene | ATP-binding cassette, sub-family B (MDR/TAP), member 6 | |
Gm29253 | 1 | 13415 | - | unclassified non-coding RNA gene | predicted gene 29253 | |
Cpgi413 | 1 | 873 | CpG island | CpG island 413 | ||
Tssr12360 | 1 | 83 | - | TSS region | transcription start site region 12360 | |
Tssr12361 | 1 | 58 | - | TSS region | transcription start site region 12361 | |
Atg9a | 1 | 11149 | - | protein coding gene | autophagy related 9A | |
Tssr12362 | 1 | 31 | - | TSS region | transcription start site region 12362 | |
Cpgi414 | 1 | 1377 | CpG island | CpG island 414 | ||
Tssr12363 | 1 | 53 | - | TSS region | transcription start site region 12363 | |
Tssr12364 | 1 | 63 | - | TSS region | transcription start site region 12364 | |
Tssr12365 | 1 | 12 | - | TSS region | transcription start site region 12365 | |
Tssr7498 | 1 | 87 | + | TSS region | transcription start site region 7498 | |
Ankzf1 | 1 | 7227 | + | protein coding gene | ankyrin repeat and zinc finger domain containing 1 | |
Tssr12366 | 1 | 51 | - | TSS region | transcription start site region 12366 | |
Glb1l | 1 | 12577 | - | protein coding gene | galactosidase, beta 1-like | |
Cpgi415 | 1 | 440 | CpG island | CpG island 415 | ||
Tssr12367 | 1 | 47 | - | TSS region | transcription start site region 12367 | |
Gm27943 | 1 | 115 | - | miRNA gene | predicted gene, 27943 | |
Cpgi416 | 1 | 650 | CpG island | CpG island 416 | ||
Tssr123 | 1 | 13 | - | TSS region | transcription start site region 123 | |
Tssr12368 | 1 | 75 | - | TSS region | transcription start site region 12368 | |
Tssr7499 | 1 | 78 | + | TSS region | transcription start site region 7499 | |
Stk16 | 1 | 4768 | + | protein coding gene | serine/threonine kinase 16 | |
Tuba4a | 1 | 4888 | - | protein coding gene | tubulin, alpha 4A | |
Tssr12369 | 1 | 12 | - | TSS region | transcription start site region 12369 | |
Tssr12370 | 1 | 30 | - | TSS region | transcription start site region 12370 | |
Tssr12371 | 1 | 22 | - | TSS region | transcription start site region 12371 | |
Tssr12372 | 1 | 10 | - | TSS region | transcription start site region 12372 | |
Tssr12373 | 1 | 11 | - | TSS region | transcription start site region 12373 | |
Cpgi417 | 1 | 1728 | CpG island | CpG island 417 | ||
Tssr12374 | 1 | 17 | - | TSS region | transcription start site region 12374 | |
Tssr12375 | 1 | 38 | - | TSS region | transcription start site region 12375 | |
Tssr12376 | 1 | 11 | - | TSS region | transcription start site region 12376 | |
A630095N17Rik | 1 | 12007 | - | protein coding gene | RIKEN cDNA A630095N17 gene | |
Cpgi418 | 1 | 937 | CpG island | CpG island 418 | ||
Tssr12377 | 1 | 22 | - | TSS region | transcription start site region 12377 | |
Tssr12378 | 1 | 23 | - | TSS region | transcription start site region 12378 | |
Tssr7500 | 1 | 29 | + | TSS region | transcription start site region 7500 | |
Dnajb2 | 1 | 9286 | + | protein coding gene | DnaJ heat shock protein family (Hsp40) member B2 | |
Tssr7501 | 1 | 30 | + | TSS region | transcription start site region 7501 | |
Tssr7502 | 1 | 21 | + | TSS region | transcription start site region 7502 | |
Tssr7503 | 1 | 23 | + | TSS region | transcription start site region 7503 | |
Tssr7504 | 1 | 21 | + | TSS region | transcription start site region 7504 | |
Tssr7505 | 1 | 11 | + | TSS region | transcription start site region 7505 | |
Tssr7506 | 1 | 11 | + | TSS region | transcription start site region 7506 | |
Tssr7507 | 1 | 6 | + | TSS region | transcription start site region 7507 | |
Tssr7508 | 1 | 8 | + | TSS region | transcription start site region 7508 | |
Tssr7509 | 1 | 38 | + | TSS region | transcription start site region 7509 | |
Tssr12379 | 1 | 19 | - | TSS region | transcription start site region 12379 | |
Tssr7510 | 1 | 8 | + | TSS region | transcription start site region 7510 | |
Tssr7511 | 1 | 18 | + | TSS region | transcription start site region 7511 | |
Ptprn | 1 | 17462 | - | protein coding gene | protein tyrosine phosphatase, receptor type, N | |
Tssr7512 | 1 | 8 | + | TSS region | transcription start site region 7512 | |
Cpgi419 | 1 | 413 | CpG island | CpG island 419 | ||
Gm28294 | 1 | 5105 | + | antisense lncRNA gene | predicted gene 28294 | |
Tssr12380 | 1 | 18 | - | TSS region | transcription start site region 12380 | |
Tssr12381 | 1 | 24 | - | TSS region | transcription start site region 12381 | |
Cpgi420 | 1 | 801 | CpG island | CpG island 420 | ||
Tssr12382 | 1 | 60 | - | TSS region | transcription start site region 12382 | |
Tssr12383 | 1 | 24 | - | TSS region | transcription start site region 12383 | |
Tssr12384 | 1 | 1 | - | TSS region | transcription start site region 12384 | |
Tssr12385 | 1 | 9 | - | TSS region | transcription start site region 12385 | |
Tssr12386 | 1 | 9 | - | TSS region | transcription start site region 12386 | |
Tssr12387 | 1 | 17 | - | TSS region | transcription start site region 12387 | |
Resp18 | 1 | 6216 | - | protein coding gene | regulated endocrine-specific protein 18 | |
Gm28902 | 1 | 3047 | + | antisense lncRNA gene | predicted gene 28902 | |
Cpgi421 | 1 | 173 | CpG island | CpG island 421 | ||
Tssr12388 | 1 | 95 | - | TSS region | transcription start site region 12388 | |
Tssr12389 | 1 | 14 | - | TSS region | transcription start site region 12389 | |
D1Mcg7 | 1 | 211 | DNA segment | DNA segment, Chr 1, McGill University 7 | ||
Dnpep | 1 | 9089 | - | protein coding gene | aspartyl aminopeptidase | |
Cpgi422 | 1 | 1689 | CpG island | CpG island 422 | ||
Tssr12390 | 1 | 23 | - | TSS region | transcription start site region 12390 | |
Tssr12391 | 1 | 36 | - | TSS region | transcription start site region 12391 | |
Tssr12392 | 1 | 27 | - | TSS region | transcription start site region 12392 | |
Tssr12393 | 1 | 14 | - | TSS region | transcription start site region 12393 | |
Tssr12394 | 1 | 43 | - | TSS region | transcription start site region 12394 | |
Tssr12395 | 1 | 131 | - | TSS region | transcription start site region 12395 | |
Tssr12396 | 1 | 9 | - | TSS region | transcription start site region 12396 | |
Tssr12397 | 1 | 22 | - | TSS region | transcription start site region 12397 | |
D1Mit61 | 1 | 146 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 61 | ||
Cpgi423 | 1 | 1165 | CpG island | CpG island 423 | ||
Tssr7513 | 1 | 27 | + | TSS region | transcription start site region 7513 | |
Tssr7514 | 1 | 17 | + | TSS region | transcription start site region 7514 | |
Des | 1 | 8250 | + | protein coding gene | desmin | |
Tssr7515 | 1 | 11 | + | TSS region | transcription start site region 7515 | |
Tssr7516 | 1 | 29 | + | TSS region | transcription start site region 7516 | |
Tssr7517 | 1 | 15 | + | TSS region | transcription start site region 7517 | |
Tssr12398 | 1 | 41 | - | TSS region | transcription start site region 12398 | |
Tssr12399 | 1 | 36 | - | TSS region | transcription start site region 12399 | |
Tssr7518 | 1 | 39 | + | TSS region | transcription start site region 7518 | |
Tssr7519 | 1 | 47 | + | TSS region | transcription start site region 7519 | |
Gm15179 | 1 | 6800 | - | antisense lncRNA gene | predicted gene 15179 | |
Cpgi424 | 1 | 370 | CpG island | CpG island 424 | ||
Tssr12400 | 1 | 37 | - | TSS region | transcription start site region 12400 | |
Tssr12401 | 1 | 29 | - | TSS region | transcription start site region 12401 | |
Cpgi425 | 1 | 693 | CpG island | CpG island 425 | ||
Tssr7520 | 1 | 54 | + | TSS region | transcription start site region 7520 | |
Speg | 1 | 57023 | + | protein coding gene | SPEG complex locus | |
Tssr7521 | 1 | 11 | + | TSS region | transcription start site region 7521 | |
Cpgi426 | 1 | 1089 | CpG island | CpG island 426 | ||
Tssr7522 | 1 | 19 | + | TSS region | transcription start site region 7522 | |
Tssr7523 | 1 | 12 | + | TSS region | transcription start site region 7523 | |
Tssr7524 | 1 | 30 | + | TSS region | transcription start site region 7524 | |
Tssr7525 | 1 | 3 | + | TSS region | transcription start site region 7525 | |
Tssr7526 | 1 | 13 | + | TSS region | transcription start site region 7526 | |
Cpgi427 | 1 | 729 | CpG island | CpG island 427 | ||
Tssr7527 | 1 | 57 | + | TSS region | transcription start site region 7527 | |
Jckm2 | 1 | -58410381 | QTL | juvenile cystic kidney modifier 2 |