Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Tssr7449 | 1 | 13 | + | TSS region | transcription start site region 7449 | |
Tssr7450 | 1 | 23 | + | TSS region | transcription start site region 7450 | |
Tssr7451 | 1 | 33 | + | TSS region | transcription start site region 7451 | |
Tssr7452 | 1 | 11 | + | TSS region | transcription start site region 7452 | |
Tssr7453 | 1 | 28 | + | TSS region | transcription start site region 7453 | |
Tssr7454 | 1 | 29 | + | TSS region | transcription start site region 7454 | |
Cpgi389 | 1 | 415 | CpG island | CpG island 389 | ||
Tssr7455 | 1 | 17 | + | TSS region | transcription start site region 7455 | |
Cyp27a1 | 1 | 24318 | + | protein coding gene | cytochrome P450, family 27, subfamily a, polypeptide 1 | |
Tssr7456 | 1 | 4 | + | TSS region | transcription start site region 7456 | |
Tssr7457 | 1 | 17 | + | TSS region | transcription start site region 7457 | |
Prkag3 | 1 | 10299 | - | protein coding gene | protein kinase, AMP-activated, gamma 3 non-catalytic subunit | |
Tssr12323 | 1 | 9 | - | TSS region | transcription start site region 12323 | |
Cpgi390 | 1 | 475 | CpG island | CpG island 390 | ||
Tssr12324 | 1 | 33 | - | TSS region | transcription start site region 12324 | |
Tssr12325 | 1 | 13 | - | TSS region | transcription start site region 12325 | |
Gm27507 | 1 | 92 | + | unclassified non-coding RNA gene | predicted gene, 27507 | |
Cpgi391 | 1 | 1526 | CpG island | CpG island 391 | ||
Tssr7458 | 1 | 26 | + | TSS region | transcription start site region 7458 | |
Tssr7459 | 1 | 29 | + | TSS region | transcription start site region 7459 | |
Tssr7460 | 1 | 25 | + | TSS region | transcription start site region 7460 | |
Wnt6 | 1 | 13430 | + | protein coding gene | wingless-type MMTV integration site family, member 6 | |
Tssr7461 | 1 | 18 | + | TSS region | transcription start site region 7461 | |
Tssr7462 | 1 | 7 | + | TSS region | transcription start site region 7462 | |
Gm29539 | 1 | 2462 | - | antisense lncRNA gene | predicted gene 29539 | |
Tssr7463 | 1 | 22 | + | TSS region | transcription start site region 7463 | |
Cpgi392 | 1 | 960 | CpG island | CpG island 392 | ||
Cpgi393 | 1 | 1097 | CpG island | CpG island 393 | ||
Gm32099 | 1 | 8164 | - | lncRNA gene | predicted gene, 32099 | |
Cpgi394 | 1 | 1124 | CpG island | CpG island 394 | ||
Tssr7464 | 1 | 18 | + | TSS region | transcription start site region 7464 | |
Tssr7465 | 1 | 12 | + | TSS region | transcription start site region 7465 | |
Wnt10a | 1 | 12157 | + | protein coding gene | wingless-type MMTV integration site family, member 10A | |
Tssr7466 | 1 | 53 | + | TSS region | transcription start site region 7466 | |
Tssr7467 | 1 | 20 | + | TSS region | transcription start site region 7467 | |
Cpgi395 | 1 | 1056 | CpG island | CpG island 395 | ||
Tssr7468 | 1 | 13 | + | TSS region | transcription start site region 7468 | |
Tssr7469 | 1 | 3 | + | TSS region | transcription start site region 7469 | |
Cpgi396 | 1 | 580 | CpG island | CpG island 396 | ||
Cpgi397 | 1 | 943 | CpG island | CpG island 397 | ||
Cpgi398 | 1 | 276 | CpG island | CpG island 398 | ||
n-TGgcc3 | 1 | 70 | - | tRNA gene | nuclear encoded tRNA glycine 3 (anticodon GCC) | |
Cpgi399 | 1 | 483 | CpG island | CpG island 399 | ||
Tssr7470 | 1 | 39 | + | TSS region | transcription start site region 7470 | |
Tssr7471 | 1 | 23 | + | TSS region | transcription start site region 7471 | |
Tssr7472 | 1 | 11 | + | TSS region | transcription start site region 7472 | |
Gm32275 | 1 | 22719 | - | lncRNA gene | predicted gene, 32275 | |
Gm16582 | 1 | 29058 | + | lncRNA gene | predicted gene 16582 | |
Tssr12326 | 1 | 8 | - | TSS region | transcription start site region 12326 | |
Cpgi400 | 1 | 2150 | CpG island | CpG island 400 | ||
Tssr7473 | 1 | 35 | + | TSS region | transcription start site region 7473 | |
Tssr7474 | 1 | 11 | + | TSS region | transcription start site region 7474 | |
Cdk5r2 | 1 | 2703 | + | protein coding gene | cyclin-dependent kinase 5, regulatory subunit 2 (p39) | |
Tssr7475 | 1 | 13 | + | TSS region | transcription start site region 7475 | |
Tssr7476 | 1 | 20 | + | TSS region | transcription start site region 7476 | |
Tssr7477 | 1 | 10 | + | TSS region | transcription start site region 7477 | |
Tssr7478 | 1 | 3 | + | TSS region | transcription start site region 7478 | |
Tssr7479 | 1 | 23 | + | TSS region | transcription start site region 7479 | |
Cpgi401 | 1 | 191 | CpG island | CpG island 401 | ||
Cpgi402 | 1 | 1025 | CpG island | CpG island 402 | ||
Fev | 1 | 3910 | - | protein coding gene | FEV (ETS oncogene family) | |
Cpgi403 | 1 | 1482 | CpG island | CpG island 403 | ||
Cpgi404 | 1 | 1643 | CpG island | CpG island 404 | ||
Tssr7480 | 1 | 9 | + | TSS region | transcription start site region 7480 | |
Tssr7481 | 1 | 3 | + | TSS region | transcription start site region 7481 | |
Cryba2 | 1 | 3209 | - | protein coding gene | crystallin, beta A2 | |
Cpgi405 | 1 | 1035 | CpG island | CpG island 405 | ||
Tssr12327 | 1 | 13 | - | TSS region | transcription start site region 12327 | |
Tssr12328 | 1 | 14 | - | TSS region | transcription start site region 12328 | |
Cpgi406 | 1 | 839 | CpG island | CpG island 406 | ||
Mir375 | 1 | 63 | - | miRNA gene | microRNA 375 | |
Tssr12329 | 1 | 3 | - | TSS region | transcription start site region 12329 | |
Cfap65 | 1 | 33528 | - | protein coding gene | cilia and flagella associated protein 65 | |
Gm15841 | 1 | 5282 | + | antisense lncRNA gene | predicted gene 15841 | |
Tssr12330 | 1 | 4 | - | TSS region | transcription start site region 12330 | |
Tssr12331 | 1 | 64 | - | TSS region | transcription start site region 12331 | |
Ihh | 1 | 6357 | - | protein coding gene | Indian hedgehog | |
Cpgi407 | 1 | 765 | CpG island | CpG island 407 | ||
Cpgi408 | 1 | 2670 | CpG island | CpG island 408 | ||
Tssr12332 | 1 | 12 | - | TSS region | transcription start site region 12332 | |
Tssr12333 | 1 | 16 | - | TSS region | transcription start site region 12333 | |
Egrm1 | 1 | 103 | QTL | early growth rate, maternal effect 1 | ||
Skl1 | 1 | 103 | QTL | skeletal size (tail length) 1 | ||
D1Mit7 | 1 | 103 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 7 | ||
Skull1 | 1 | 103 | QTL | skull morphology 1 | ||
Gm37744 | 1 | 1589 | + | unclassified gene | predicted gene, 37744 | |
Nhej1 | 1 | 157880 | - | protein coding gene | nonhomologous end-joining factor 1 | |
Tssr12334 | 1 | 14 | - | TSS region | transcription start site region 12334 | |
D1Mit252 | 1 | 148 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 252 | ||
D1Mit252.1 | 1 | 112 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 252.1 | ||
Tssr7482 | 1 | 5 | + | TSS region | transcription start site region 7482 | |
D1Mit23 | 1 | 131 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 23 | ||
Cpgi409 | 1 | 830 | CpG island | CpG island 409 | ||
Tssr12335 | 1 | 14 | - | TSS region | transcription start site region 12335 | |
Tssr12336 | 1 | 28 | - | TSS region | transcription start site region 12336 | |
Tssr12337 | 1 | 27 | - | TSS region | transcription start site region 12337 | |
Slc23a3 | 1 | 8349 | - | protein coding gene | solute carrier family 23 (nucleobase transporters), member 3 | |
Tssr7483 | 1 | 2 | + | TSS region | transcription start site region 7483 | |
Tssr12338 | 1 | 23 | - | TSS region | transcription start site region 12338 | |
Tssr12339 | 1 | 20 | - | TSS region | transcription start site region 12339 | |
Tssr12340 | 1 | 12 | - | TSS region | transcription start site region 12340 | |
Tssr12341 | 1 | 5 | - | TSS region | transcription start site region 12341 | |
Tssr12342 | 1 | 9 | - | TSS region | transcription start site region 12342 | |
Tssr12343 | 1 | 30 | - | TSS region | transcription start site region 12343 | |
Tssr12344 | 1 | 5 | - | TSS region | transcription start site region 12344 | |
Tssr12345 | 1 | 22 | - | TSS region | transcription start site region 12345 | |
Tssr12346 | 1 | 20 | - | TSS region | transcription start site region 12346 | |
Cnppd1 | 1 | 7518 | - | protein coding gene | cyclin Pas1/PHO80 domain containing 1 | |
Tssr12347 | 1 | 13 | - | TSS region | transcription start site region 12347 | |
Tssr12348 | 1 | 20 | - | TSS region | transcription start site region 12348 | |
Tssr12349 | 1 | 4 | - | TSS region | transcription start site region 12349 | |
Cpgi410 | 1 | 760 | CpG island | CpG island 410 | ||
Tssr12350 | 1 | 6 | - | TSS region | transcription start site region 12350 | |
Tssr12351 | 1 | 12 | - | TSS region | transcription start site region 12351 | |
Tssr12352 | 1 | 13 | - | TSS region | transcription start site region 12352 | |
Tssr12353 | 1 | 34 | - | TSS region | transcription start site region 12353 | |
Tssr12354 | 1 | 22 | - | TSS region | transcription start site region 12354 | |
Tssr7484 | 1 | 72 | + | TSS region | transcription start site region 7484 | |
Tssr12355 | 1 | 14 | - | TSS region | transcription start site region 12355 | |
Tssr7485 | 1 | 11 | + | TSS region | transcription start site region 7485 | |
Tssr12356 | 1 | 11 | - | TSS region | transcription start site region 12356 | |
Cpgi411 | 1 | 1277 | CpG island | CpG island 411 | ||
Tssr12357 | 1 | 30 | - | TSS region | transcription start site region 12357 | |
Tssr12358 | 1 | 64 | - | TSS region | transcription start site region 12358 | |
Tssr7486 | 1 | 50 | + | TSS region | transcription start site region 7486 | |
Tssr7487 | 1 | 17 | + | TSS region | transcription start site region 7487 | |
Tssr12359 | 1 | 91 | - | TSS region | transcription start site region 12359 | |
Tssr7488 | 1 | 24 | + | TSS region | transcription start site region 7488 | |
Tssr7489 | 1 | 11 | + | TSS region | transcription start site region 7489 | |
Tssr7490 | 1 | 22 | + | TSS region | transcription start site region 7490 | |
Retreg2 | 1 | 5123 | + | protein coding gene | reticulophagy regulator family member 2 | |
Tssr7491 | 1 | 11 | + | TSS region | transcription start site region 7491 | |
Tssr7492 | 1 | 9 | + | TSS region | transcription start site region 7492 | |
Tssr7493 | 1 | 28 | + | TSS region | transcription start site region 7493 | |
Tssr7494 | 1 | 20 | + | TSS region | transcription start site region 7494 | |
Cpgi412 | 1 | 868 | CpG island | CpG island 412 | ||
Tssr7495 | 1 | 25 | + | TSS region | transcription start site region 7495 | |
Zfand2b | 1 | 2980 | + | protein coding gene | zinc finger, AN1 type domain 2B | |
Tssr7496 | 1 | 23 | + | TSS region | transcription start site region 7496 | |
Tssr7497 | 1 | 26 | + | TSS region | transcription start site region 7497 | |
Abcb6 | 1 | 8675 | - | protein coding gene | ATP-binding cassette, sub-family B (MDR/TAP), member 6 | |
Gm29253 | 1 | 13415 | - | unclassified non-coding RNA gene | predicted gene 29253 | |
Cpgi413 | 1 | 873 | CpG island | CpG island 413 | ||
Tssr12360 | 1 | 83 | - | TSS region | transcription start site region 12360 | |
Tssr12361 | 1 | 58 | - | TSS region | transcription start site region 12361 | |
Atg9a | 1 | 11149 | - | protein coding gene | autophagy related 9A | |
Tssr12362 | 1 | 31 | - | TSS region | transcription start site region 12362 | |
Cpgi414 | 1 | 1377 | CpG island | CpG island 414 | ||
Tssr12363 | 1 | 53 | - | TSS region | transcription start site region 12363 | |
Tssr12364 | 1 | 63 | - | TSS region | transcription start site region 12364 | |
Tssr12365 | 1 | 12 | - | TSS region | transcription start site region 12365 | |
Tssr7498 | 1 | 87 | + | TSS region | transcription start site region 7498 | |
Ankzf1 | 1 | 7227 | + | protein coding gene | ankyrin repeat and zinc finger domain containing 1 | |
Tssr12366 | 1 | 51 | - | TSS region | transcription start site region 12366 | |
Jckm2 | 1 | -58410381 | QTL | juvenile cystic kidney modifier 2 |