Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:74272649-74392692

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84 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr7370 1 74277104 to 74277120 16 + TSS region transcription start site region 7370
Gpbar1 1 74278600 to 74279589 989 + protein coding gene G protein-coupled bile acid receptor 1
Aamp 1 74279840 to 74284738 4898 - protein coding gene angio-associated migratory protein
Tssr12291 1 74281112 to 74281147 35 - TSS region transcription start site region 12291
Tssr7371 1 74281156 to 74281176 20 + TSS region transcription start site region 7371
Gm28364 1 74281161 to 74281866 705 + antisense lncRNA gene predicted gene 28364
Tssr7372 1 74281182 to 74281202 20 + TSS region transcription start site region 7372
Tssr7373 1 74281214 to 74281223 9 + TSS region transcription start site region 7373
Tssr7374 1 74281225 to 74281228 3 + TSS region transcription start site region 7374
Cpgi374 1 74284203 to 74285499 1296 CpG island CpG island 374
Tssr12292 1 74284352 to 74284361 9 - TSS region transcription start site region 12292
Tssr12293 1 74284377 to 74284436 59 - TSS region transcription start site region 12293
Tssr7375 1 74284488 to 74284499 11 + TSS region transcription start site region 7375
Tssr12294 1 74284636 to 74284712 76 - TSS region transcription start site region 12294
Pnkd 1 74284930 to 74353694 68764 + protein coding gene paroxysmal nonkinesiogenic dyskinesia
Tssr7376 1 74285039 to 74285072 33 + TSS region transcription start site region 7376
Gm37503 1 74287542 to 74287860 318 - unclassified gene predicted gene, 37503
Tmbim1 1 74288247 to 74304336 16089 - protein coding gene transmembrane BAX inhibitor motif containing 1
Tssr7377 1 74293956 to 74293983 27 + TSS region transcription start site region 7377
Tssr12295 1 74295281 to 74295302 21 - TSS region transcription start site region 12295
Tssr12296 1 74295318 to 74295404 86 - TSS region transcription start site region 12296
Gm29358 1 74295603 to 74298867 3264 + sense intronic lncRNA gene predicted gene 29358
Tssr7378 1 74295634 to 74295647 13 + TSS region transcription start site region 7378
Tssr7379 1 74295663 to 74295672 9 + TSS region transcription start site region 7379
Tssr12297 1 74295785 to 74295794 9 - TSS region transcription start site region 12297
Tssr7380 1 74295998 to 74296001 3 + TSS region transcription start site region 7380
D1Ertd408e 1 74298884 to 74299094 210 DNA segment DNA segment, Chr 1, ERATO Doi 408, expressed
Tssr7381 1 74303275 to 74303281 6 + TSS region transcription start site region 7381
Cpgi375 1 74303664 to 74304363 699 CpG island CpG island 375
2410125D13Rik 1 74303679 to 74304568 889 unclassified gene RIKEN cDNA 2410125D13 gene
Tssr12298 1 74303937 to 74303978 41 - TSS region transcription start site region 12298
Tssr12299 1 74304146 to 74304187 41 - TSS region transcription start site region 12299
Tssr12300 1 74304191 to 74304202 11 - TSS region transcription start site region 12300
Tssr7382 1 74304288 to 74304293 5 + TSS region transcription start site region 7382
Tssr12301 1 74304313 to 74304343 30 - TSS region transcription start site region 12301
Tssr12302 1 74304345 to 74304377 32 - TSS region transcription start site region 12302
Tssr12303 1 74304386 to 74304407 21 - TSS region transcription start site region 12303
Tssr12304 1 74305607 to 74305621 14 - TSS region transcription start site region 12304
Gm37931 1 74307848 to 74310713 2865 + unclassified gene predicted gene, 37931
Cpgi376 1 74332309 to 74332879 570 CpG island CpG island 376
Tssr7383 1 74332596 to 74332641 45 + TSS region transcription start site region 7383
Tssr7384 1 74332649 to 74332692 43 + TSS region transcription start site region 7384
Tssr12305 1 74337818 to 74337848 30 - TSS region transcription start site region 12305
Tssr7385 1 74351970 to 74351989 19 + TSS region transcription start site region 7385
Tssr7386 1 74352447 to 74352468 21 + TSS region transcription start site region 7386
Catip 1 74362108 to 74369321 7213 + protein coding gene ciliogenesis associated TTC17 interacting protein
Tssr7387 1 74362122 to 74362156 34 + TSS region transcription start site region 7387
Cpgi377 1 74368189 to 74369159 970 CpG island CpG island 377
D1Mcg4 1 74374801 to 74374974 173 DNA segment DNA segment, Chr 1, McGill University 4
Tssr7388 1 74375143 to 74375172 29 + TSS region transcription start site region 7388
Slc11a1 1 74375195 to 74386062 10867 + protein coding gene solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1
Tssr7389 1 74375208 to 74375229 21 + TSS region transcription start site region 7389
Tssr7390 1 74375235 to 74375257 22 + TSS region transcription start site region 7390
Tssr7391 1 74375258 to 74375269 11 + TSS region transcription start site region 7391
Tssr7392 1 74375277 to 74375289 12 + TSS region transcription start site region 7392
Tssr7393 1 74375566 to 74375577 11 + TSS region transcription start site region 7393
Tssr7394 1 74375583 to 74375605 22 + TSS region transcription start site region 7394
Tssr7395 1 74377148 to 74377159 11 + TSS region transcription start site region 7395
Tssr7396 1 74380901 to 74380918 17 + TSS region transcription start site region 7396
Tssr7397 1 74381643 to 74381652 9 + TSS region transcription start site region 7397
Tssr7398 1 74381727 to 74381736 9 + TSS region transcription start site region 7398
Tssr7399 1 74381742 to 74381751 9 + TSS region transcription start site region 7399
Tssr7400 1 74381766 to 74381777 11 + TSS region transcription start site region 7400
Tssr7401 1 74382351 to 74382364 13 + TSS region transcription start site region 7401
Tssr7402 1 74382367 to 74382380 13 + TSS region transcription start site region 7402
Tssr7403 1 74382467 to 74382480 13 + TSS region transcription start site region 7403
Tssr121 1 74385287 to 74385294 7 + TSS region transcription start site region 121
Tssr7404 1 74385474 to 74385509 35 + TSS region transcription start site region 7404
Cpgi378 1 74386714 to 74387085 371 CpG island CpG island 378
Cpgi379 1 74389677 to 74390264 587 CpG island CpG island 379
Cpgi380 1 74391290 to 74392820 1530 CpG island CpG island 380
Tssr7405 1 74391390 to 74391397 7 + TSS region transcription start site region 7405
Tssr7406 1 74391416 to 74391477 61 + TSS region transcription start site region 7406
Tssr7407 1 74391479 to 74391495 16 + TSS region transcription start site region 7407
Tssr7408 1 74391541 to 74391550 9 + TSS region transcription start site region 7408
Tssr7409 1 74391562 to 74391573 11 + TSS region transcription start site region 7409
Tssr7410 1 74391577 to 74391594 17 + TSS region transcription start site region 7410
Ctdsp1 1 74391609 to 74397285 5676 + protein coding gene CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
Tssr7411 1 74391632 to 74391684 52 + TSS region transcription start site region 7411
Tssr7412 1 74391687 to 74391716 29 + TSS region transcription start site region 7412
Tssr7413 1 74391740 to 74391760 20 + TSS region transcription start site region 7413
Tssr7414 1 74391805 to 74391829 24 + TSS region transcription start site region 7414
Tssr7415 1 74391847 to 74391870 23 + TSS region transcription start site region 7415
Tssr7416 1 74391872 to 74391885 13 + TSS region transcription start site region 7416