Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:74025641-74285669

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90 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tns1 1 73910231 to 74124449 214218 - protein coding gene tensin 1
Tssr12253 1 74026923 to 74026955 32 - TSS region transcription start site region 12253
Tssr12254 1 74026960 to 74026971 11 - TSS region transcription start site region 12254
Tssr12255 1 74028522 to 74028528 6 - TSS region transcription start site region 12255
Tssr12256 1 74030824 to 74030846 22 - TSS region transcription start site region 12256
Tssr12257 1 74030862 to 74030878 16 - TSS region transcription start site region 12257
Tssr12258 1 74030881 to 74030894 13 - TSS region transcription start site region 12258
Tssr12259 1 74030897 to 74030907 10 - TSS region transcription start site region 12259
Gm39664 1 74030951 to 74032927 1976 + lncRNA gene predicted gene, 39664
Tssr7352 1 74031329 to 74031338 9 + TSS region transcription start site region 7352
Tssr12260 1 74035324 to 74035352 28 - TSS region transcription start site region 12260
Tssr12261 1 74036202 to 74036224 22 - TSS region transcription start site region 12261
Tssr12262 1 74036225 to 74036235 10 - TSS region transcription start site region 12262
Cpgi368 1 74036828 to 74037396 568 CpG island CpG island 368
Tssr12263 1 74037120 to 74037139 19 - TSS region transcription start site region 12263
Tssr12264 1 74048829 to 74048840 11 - TSS region transcription start site region 12264
Cpgi369 1 74068056 to 74069047 991 CpG island CpG island 369
Tssr12265 1 74068641 to 74068677 36 - TSS region transcription start site region 12265
Tssr12266 1 74068683 to 74068713 30 - TSS region transcription start site region 12266
Tssr12267 1 74068865 to 74068908 43 - TSS region transcription start site region 12267
Tssr12268 1 74068916 to 74068974 58 - TSS region transcription start site region 12268
Tssr12269 1 74069211 to 74069230 19 - TSS region transcription start site region 12269
Tssr12270 1 74069879 to 74069888 9 - TSS region transcription start site region 12270
Tssr12271 1 74070050 to 74070081 31 - TSS region transcription start site region 12271
Tssr12272 1 74070159 to 74070172 13 - TSS region transcription start site region 12272
Tssr12273 1 74070208 to 74070233 25 - TSS region transcription start site region 12273
Tssr12274 1 74091283 to 74091320 37 - TSS region transcription start site region 12274
Tssr12275 1 74091329 to 74091336 7 - TSS region transcription start site region 12275
Tssr12276 1 74093581 to 74093583 2 - TSS region transcription start site region 12276
Gm31637 1 74095284 to 74097049 1765 + lncRNA gene predicted gene, 31637
Tssr12277 1 74096849 to 74096864 15 - TSS region transcription start site region 12277
Cpgi370 1 74098163 to 74099086 923 CpG island CpG island 370
Tssr12278 1 74108298 to 74108309 11 - TSS region transcription start site region 12278
Tssr12279 1 74108314 to 74108340 26 - TSS region transcription start site region 12279
Tssr12280 1 74108356 to 74108370 14 - TSS region transcription start site region 12280
Tssr12281 1 74108372 to 74108381 9 - TSS region transcription start site region 12281
Cpgi371 1 74124094 to 74125242 1148 CpG island CpG island 371
Tssr12282 1 74124420 to 74124466 46 - TSS region transcription start site region 12282
Tssr12283 1 74124482 to 74124495 13 - TSS region transcription start site region 12283
Tssr12284 1 74124515 to 74124572 57 - TSS region transcription start site region 12284
Tssr7353 1 74125535 to 74125568 33 + TSS region transcription start site region 7353
Rufy4 1 74125541 to 74148223 22682 + protein coding gene RUN and FYVE domain containing 4
Tssr12285 1 74150652 to 74150696 44 - TSS region transcription start site region 12285
Tssr7354 1 74153981 to 74154003 22 + TSS region transcription start site region 7354
Cxcr2 1 74153994 to 74161246 7252 + protein coding gene chemokine (C-X-C motif) receptor 2
Tssr7355 1 74154011 to 74154035 24 + TSS region transcription start site region 7355
Tssr7356 1 74154082 to 74154085 3 + TSS region transcription start site region 7356
Tssr7357 1 74155641 to 74155669 28 + TSS region transcription start site region 7357
Tssr7358 1 74155670 to 74155686 16 + TSS region transcription start site region 7358
Tssr7359 1 74155694 to 74155705 11 + TSS region transcription start site region 7359
Tssr119 1 74178640 to 74178646 6 - TSS region transcription start site region 119
Tssr12286 1 74181608 to 74181637 29 - TSS region transcription start site region 12286
Cxcr1 1 74191785 to 74194631 2846 - protein coding gene chemokine (C-X-C motif) receptor 1
Cpgi372 1 74192190 to 74192650 460 CpG island CpG island 372
Tssr12287 1 74194653 to 74194658 5 - TSS region transcription start site region 12287
Mir1928 1 74206554 to 74206620 66 - miRNA gene microRNA 1928
Gm31691 1 74208480 to 74215644 7164 - lncRNA gene predicted gene, 31691
Gm25524 1 74212813 to 74212919 106 + snRNA gene predicted gene, 25524
Tssr7360 1 74233042 to 74233055 13 + TSS region transcription start site region 7360
Cpgi373 1 74236056 to 74237364 1308 CpG island CpG island 373
Tssr7361 1 74236479 to 74236598 119 + TSS region transcription start site region 7361
Arpc2 1 74236505 to 74268213 31708 + protein coding gene actin related protein 2/3 complex, subunit 2
Tssr7362 1 74236602 to 74236628 26 + TSS region transcription start site region 7362
Tssr12288 1 74236651 to 74236681 30 - TSS region transcription start site region 12288
Tssr7363 1 74238292 to 74238320 28 + TSS region transcription start site region 7363
Tssr7364 1 74245986 to 74245989 3 + TSS region transcription start site region 7364
Tssr120 1 74249121 to 74249132 11 + TSS region transcription start site region 120
Tssr7365 1 74260016 to 74260020 4 + TSS region transcription start site region 7365
Tssr7366 1 74261120 to 74261136 16 + TSS region transcription start site region 7366
Tssr7367 1 74263733 to 74263794 61 + TSS region transcription start site region 7367
Tssr7368 1 74267767 to 74267794 27 + TSS region transcription start site region 7368
Tssr7369 1 74267806 to 74267849 43 + TSS region transcription start site region 7369
Tssr12289 1 74267979 to 74267990 11 - TSS region transcription start site region 12289
Tssr12290 1 74268180 to 74268212 32 - TSS region transcription start site region 12290
Tssr7370 1 74277104 to 74277120 16 + TSS region transcription start site region 7370
Gpbar1 1 74278600 to 74279589 989 + protein coding gene G protein-coupled bile acid receptor 1
Aamp 1 74279840 to 74284738 4898 - protein coding gene angio-associated migratory protein
Tssr12291 1 74281112 to 74281147 35 - TSS region transcription start site region 12291
Tssr7371 1 74281156 to 74281176 20 + TSS region transcription start site region 7371
Gm28364 1 74281161 to 74281866 705 + antisense lncRNA gene predicted gene 28364
Tssr7372 1 74281182 to 74281202 20 + TSS region transcription start site region 7372
Tssr7373 1 74281214 to 74281223 9 + TSS region transcription start site region 7373
Tssr7374 1 74281225 to 74281228 3 + TSS region transcription start site region 7374
Cpgi374 1 74284203 to 74285499 1296 CpG island CpG island 374
Tssr12292 1 74284352 to 74284361 9 - TSS region transcription start site region 12292
Tssr12293 1 74284377 to 74284436 59 - TSS region transcription start site region 12293
Tssr7375 1 74284488 to 74284499 11 + TSS region transcription start site region 7375
Tssr12294 1 74284636 to 74284712 76 - TSS region transcription start site region 12294
Pnkd 1 74284930 to 74353694 68764 + protein coding gene paroxysmal nonkinesiogenic dyskinesia
Tssr7376 1 74285039 to 74285072 33 + TSS region transcription start site region 7376