Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:72866148-73047738

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eae30 1 45378613 to 72935898 27557285 QTL experimental allergic encephalomyelitis susceptibility 30
Igfbp5 1 72858065 to 72874865 16800 - protein coding gene insulin-like growth factor binding protein 5
Cpgi363 1 72870213 to 72870554 341 CpG island CpG island 363
Cpgi364 1 72871737 to 72872172 435 CpG island CpG island 364
Cpgi365 1 72873535 to 72874763 1228 CpG island CpG island 365
Tssr12200 1 72873877 to 72873917 40 - TSS region transcription start site region 12200
Tssr12201 1 72874021 to 72874053 32 - TSS region transcription start site region 12201
Tssr12202 1 72874145 to 72874208 63 - TSS region transcription start site region 12202
Tssr12203 1 72874247 to 72874262 15 - TSS region transcription start site region 12203
Tssr12204 1 72874389 to 72874408 19 - TSS region transcription start site region 12204
Tssr12205 1 72874412 to 72874451 39 - TSS region transcription start site region 12205
Tssr12206 1 72874538 to 72874547 9 - TSS region transcription start site region 12206
Tssr12207 1 72874877 to 72874891 14 - TSS region transcription start site region 12207
D1Mit281 1 72875530 to 72875655 125 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 281
Gm9551 1 72934100 to 72934963 863 - pseudogene predicted gene 9551
Tssr7344 1 72934900 to 72934924 24 + TSS region transcription start site region 7344
D1Mit380 1 72935789 to 72935898 109 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 380
Nidd5k 1 72935789 to 72935898 109 QTL Nidd5 on KK-A
Gm31047 1 72939071 to 72952744 13673 + lncRNA gene predicted gene, 31047
Tssr7345 1 72940327 to 72940333 6 + TSS region transcription start site region 7345
Tssr7346 1 72942439 to 72942449 10 + TSS region transcription start site region 7346
Tssr7347 1 72942734 to 72942739 5 + TSS region transcription start site region 7347
Tssr7348 1 72942744 to 72942754 10 + TSS region transcription start site region 7348
Gm17846 1 72956148 to 72957738 1590 - pseudogene predicted gene, 17846
Gm31137 1 72984848 to 73006028 21180 + lncRNA gene predicted gene, 31137
Tssr7349 1 73001565 to 73001567 2 + TSS region transcription start site region 7349
Tnp1 1 73015074 to 73015899 825 - protein coding gene transition protein 1
Tssr12208 1 73015884 to 73015901 17 - TSS region transcription start site region 12208
1700027A15Rik 1 73016036 to 73025508 9472 + antisense lncRNA gene RIKEN cDNA 1700027A15 gene
1700110C23Rik 1 73018144 to 73018877 733 unclassified gene RIKEN cDNA 1700110C23 gene
1700016P22Rik 1 73022484 to 73022878 394 unclassified gene RIKEN cDNA 1700016P22 gene
Tssr7350 1 73024585 to 73024590 5 + TSS region transcription start site region 7350
Tssr7351 1 73024603 to 73024621 18 + TSS region transcription start site region 7351