Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:72596238-72826252

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Smarcal1 1 72583251 to 72633134 49883 + protein coding gene SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
Cpgi359 1 72640689 to 72641400 711 CpG island CpG island 359
Gm39662 1 72641188 to 72642963 1775 + antisense lncRNA gene predicted gene, 39662
Ankar 1 72642980 to 72700564 57584 - protein coding gene ankyrin and armadillo repeat containing
D1Mit1009 1 72671495 to 72671694 199 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 1009
Gm18035 1 72692872 to 72693454 582 + pseudogene predicted gene, 18035
Tssr12172 1 72700531 to 72700542 11 - TSS region transcription start site region 12172
Tssr12173 1 72700544 to 72700556 12 - TSS region transcription start site region 12173
Tssr12174 1 72700558 to 72700584 26 - TSS region transcription start site region 12174
Gm45859 1 72706289 to 72706502 213 - pseudogene predicted gene 45859
Cpgi360 1 72710853 to 72711997 1144 CpG island CpG island 360
Tssr7309 1 72711238 to 72711252 14 + TSS region transcription start site region 7309
Tssr7310 1 72711259 to 72711296 37 + TSS region transcription start site region 7310
Rpl37a 1 72711290 to 72713813 2523 + protein coding gene ribosomal protein L37a
Tssr7311 1 72711321 to 72711330 9 + TSS region transcription start site region 7311
Gm39663 1 72726973 to 72737799 10826 - lncRNA gene predicted gene, 39663
Gm30788 1 72744536 to 72770485 25949 - lncRNA gene predicted gene, 30788
Gm30847 1 72768472 to 72821772 53300 + lncRNA gene predicted gene, 30847
Tssr12175 1 72769611 to 72769627 16 - TSS region transcription start site region 12175
Tssr12176 1 72780813 to 72780819 6 - TSS region transcription start site region 12176
Tssr12177 1 72806081 to 72806086 5 - TSS region transcription start site region 12177
Cpgi361 1 72824030 to 72825662 1632 CpG island CpG island 361
Tssr7312 1 72824482 to 72824501 19 + TSS region transcription start site region 7312
Igfbp2 1 72824503 to 72852474 27971 + protein coding gene insulin-like growth factor binding protein 2
Tssr7313 1 72824513 to 72824522 9 + TSS region transcription start site region 7313
Tssr7314 1 72824530 to 72824541 11 + TSS region transcription start site region 7314
Tssr7315 1 72824546 to 72824557 11 + TSS region transcription start site region 7315
Tssr7316 1 72824566 to 72824577 11 + TSS region transcription start site region 7316