Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:72560853-72861997

Filter by:
75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr12171 1 72578960 to 72578983 23 - TSS region transcription start site region 12171
Cpgi358 1 72583198 to 72583514 316 CpG island CpG island 358
Tssr7307 1 72583245 to 72583282 37 + TSS region transcription start site region 7307
Smarcal1 1 72583251 to 72633134 49883 + protein coding gene SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
Tssr7308 1 72583293 to 72583300 7 + TSS region transcription start site region 7308
Cpgi359 1 72640689 to 72641400 711 CpG island CpG island 359
Gm39662 1 72641188 to 72642963 1775 + antisense lncRNA gene predicted gene, 39662
Ankar 1 72642980 to 72700564 57584 - protein coding gene ankyrin and armadillo repeat containing
D1Mit1009 1 72671495 to 72671694 199 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 1009
Gm18035 1 72692872 to 72693454 582 + pseudogene predicted gene, 18035
Tssr12172 1 72700531 to 72700542 11 - TSS region transcription start site region 12172
Tssr12173 1 72700544 to 72700556 12 - TSS region transcription start site region 12173
Tssr12174 1 72700558 to 72700584 26 - TSS region transcription start site region 12174
Gm45859 1 72706289 to 72706502 213 - pseudogene predicted gene 45859
Cpgi360 1 72710853 to 72711997 1144 CpG island CpG island 360
Tssr7309 1 72711238 to 72711252 14 + TSS region transcription start site region 7309
Tssr7310 1 72711259 to 72711296 37 + TSS region transcription start site region 7310
Rpl37a 1 72711290 to 72713813 2523 + protein coding gene ribosomal protein L37a
Tssr7311 1 72711321 to 72711330 9 + TSS region transcription start site region 7311
Gm39663 1 72726973 to 72737799 10826 - lncRNA gene predicted gene, 39663
Gm30788 1 72744536 to 72770485 25949 - lncRNA gene predicted gene, 30788
Gm30847 1 72768472 to 72821772 53300 + lncRNA gene predicted gene, 30847
Tssr12175 1 72769611 to 72769627 16 - TSS region transcription start site region 12175
Tssr12176 1 72780813 to 72780819 6 - TSS region transcription start site region 12176
Tssr12177 1 72806081 to 72806086 5 - TSS region transcription start site region 12177
Cpgi361 1 72824030 to 72825662 1632 CpG island CpG island 361
Tssr7312 1 72824482 to 72824501 19 + TSS region transcription start site region 7312
Igfbp2 1 72824503 to 72852474 27971 + protein coding gene insulin-like growth factor binding protein 2
Tssr7313 1 72824513 to 72824522 9 + TSS region transcription start site region 7313
Tssr7314 1 72824530 to 72824541 11 + TSS region transcription start site region 7314
Tssr7315 1 72824546 to 72824557 11 + TSS region transcription start site region 7315
Tssr7316 1 72824566 to 72824577 11 + TSS region transcription start site region 7316
Tssr7317 1 72826574 to 72826583 9 + TSS region transcription start site region 7317
Tssr7318 1 72826618 to 72826632 14 + TSS region transcription start site region 7318
Tssr7319 1 72828631 to 72828642 11 + TSS region transcription start site region 7319
Tssr7320 1 72832893 to 72832896 3 + TSS region transcription start site region 7320
Tssr7321 1 72849079 to 72849086 7 + TSS region transcription start site region 7321
Tssr7322 1 72849108 to 72849144 36 + TSS region transcription start site region 7322
Tssr12178 1 72849115 to 72849124 9 - TSS region transcription start site region 12178
Tssr7323 1 72849151 to 72849183 32 + TSS region transcription start site region 7323
Tssr12179 1 72849158 to 72849173 15 - TSS region transcription start site region 12179
Tssr7324 1 72849200 to 72849214 14 + TSS region transcription start site region 7324
Tssr7325 1 72849215 to 72849234 19 + TSS region transcription start site region 7325
Tssr12180 1 72849222 to 72849236 14 - TSS region transcription start site region 12180
Tssr12181 1 72849243 to 72849266 23 - TSS region transcription start site region 12181
Tssr7326 1 72849245 to 72849269 24 + TSS region transcription start site region 7326
Tssr7327 1 72849274 to 72849290 16 + TSS region transcription start site region 7327
Tssr12182 1 72849286 to 72849299 13 - TSS region transcription start site region 12182
Tssr12183 1 72849307 to 72849311 4 - TSS region transcription start site region 12183
Tssr7328 1 72849577 to 72849609 32 + TSS region transcription start site region 7328
Tssr7329 1 72849612 to 72849621 9 + TSS region transcription start site region 7329
Tssr7330 1 72849626 to 72849654 28 + TSS region transcription start site region 7330
Tssr7331 1 72851995 to 72852004 9 + TSS region transcription start site region 7331
Tssr7332 1 72852024 to 72852060 36 + TSS region transcription start site region 7332
Tssr7333 1 72852069 to 72852076 7 + TSS region transcription start site region 7333
Tssr7334 1 72852084 to 72852095 11 + TSS region transcription start site region 7334
Tssr7335 1 72852100 to 72852104 4 + TSS region transcription start site region 7335
Tssr7336 1 72852154 to 72852162 8 + TSS region transcription start site region 7336
Tssr7337 1 72852175 to 72852189 14 + TSS region transcription start site region 7337
Tssr7338 1 72852215 to 72852222 7 + TSS region transcription start site region 7338
Tssr12184 1 72852216 to 72852247 31 - TSS region transcription start site region 12184
Tssr7339 1 72852239 to 72852244 5 + TSS region transcription start site region 7339
Tssr12185 1 72852278 to 72852313 35 - TSS region transcription start site region 12185
Tssr7340 1 72852304 to 72852316 12 + TSS region transcription start site region 7340
Tssr7341 1 72852421 to 72852432 11 + TSS region transcription start site region 7341
Igfbp5 1 72858065 to 72874865 16800 - protein coding gene insulin-like growth factor binding protein 5
Tssr12186 1 72858462 to 72858489 27 - TSS region transcription start site region 12186
Tssr12187 1 72858734 to 72858758 24 - TSS region transcription start site region 12187
Tssr12188 1 72859038 to 72859074 36 - TSS region transcription start site region 12188
Tssr12189 1 72859799 to 72859813 14 - TSS region transcription start site region 12189
Tssr12190 1 72860295 to 72860309 14 - TSS region transcription start site region 12190
Tssr12191 1 72861028 to 72861039 11 - TSS region transcription start site region 12191
Tssr12192 1 72861496 to 72861519 23 - TSS region transcription start site region 12192
Tssr12193 1 72861661 to 72861672 11 - TSS region transcription start site region 12193
Tssr12194 1 72861841 to 72861871 30 - TSS region transcription start site region 12194