Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:71738998-72225195

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39660 1 71728539 to 71741345 12806 - lncRNA gene predicted gene, 39660
Gm30160 1 71728540 to 71749807 21267 + lncRNA gene predicted gene, 30160
Tssr12150 1 71741325 to 71741330 5 - TSS region transcription start site region 12150
D1Mit130 1 71760111 to 71760247 136 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 130
Gm30308 1 71813563 to 71814507 944 + lncRNA gene predicted gene, 30308
Gm45958 1 71823324 to 71835845 12521 + lncRNA gene predicted gene, 45958
Gm37217 1 71843090 to 71846610 3520 - unclassified gene predicted gene, 37217
Tssr7285 1 71887916 to 71887928 12 + TSS region transcription start site region 7285
Tssr7286 1 71887974 to 71888003 29 + TSS region transcription start site region 7286
Tssr7287 1 71888055 to 71888067 12 + TSS region transcription start site region 7287
Tssr7288 1 71888076 to 71888121 45 + TSS region transcription start site region 7288
Gm8883 1 71888112 to 71891204 3092 + lincRNA gene predicted gene 8883
Tssr7289 1 71888474 to 71888491 17 + TSS region transcription start site region 7289
Gm28818 1 71894415 to 71899295 4880 - lincRNA gene predicted gene 28818
Tssr12151 1 71896445 to 71896452 7 - TSS region transcription start site region 12151
Tssr7290 1 71913515 to 71913521 6 + TSS region transcription start site region 7290
Tssr12152 1 71938615 to 71938619 4 - TSS region transcription start site region 12152
4933417E11Rik 1 71958998 to 72005195 46197 - lincRNA gene RIKEN cDNA 4933417E11 gene
4930556G22Rik 1 71983681 to 72038731 55050 - lincRNA gene RIKEN cDNA 4930556G22 gene
Gm5528 1 72004288 to 72004767 479 + pseudogene predicted gene 5528
Tssr7291 1 72074380 to 72074400 20 + TSS region transcription start site region 7291
Tssr7292 1 72087816 to 72087820 4 + TSS region transcription start site region 7292
Gm8885 1 72087857 to 72088454 597 + pseudogene predicted gene 8885
Gm4319 1 72107155 to 72122001 14846 - lincRNA gene predicted gene 4319
Tssr12153 1 72146898 to 72146908 10 - TSS region transcription start site region 12153
Tssr12154 1 72146915 to 72146931 16 - TSS region transcription start site region 12154
Mreg 1 72159442 to 72212307 52865 - protein coding gene melanoregulin
Tssr12155 1 72186503 to 72186507 4 - TSS region transcription start site region 12155
Tssr12156 1 72201318 to 72201322 4 - TSS region transcription start site region 12156
Cpgi350 1 72211615 to 72212481 866 CpG island CpG island 350
Tssr12157 1 72212249 to 72212267 18 - TSS region transcription start site region 12157
Tssr12158 1 72212310 to 72212318 8 - TSS region transcription start site region 12158
Tssr12159 1 72216867 to 72216877 10 - TSS region transcription start site region 12159
Tssr7293 1 72221751 to 72221774 23 + TSS region transcription start site region 7293