Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
W3q13 | 1 | 50867246 | QTL | weight 3 weeks QTL 13 | ||
Estoq4 | 1 | 39216699 | QTL | embryo survival total QTL 4 | ||
Lgq5 | 1 | 39216699 | QTL | late growth QTL 5 | ||
W3q12 | 1 | 39216699 | QTL | weight 3 weeks QTL 12 | ||
Lvrq3 | 1 | 39216699 | QTL | liver weight QTL 3 | ||
W6q14 | 1 | 39216699 | QTL | weight 6 weeks QTL 14 | ||
W10q6 | 1 | 39216699 | QTL | weight 10 weeks QTL 6 | ||
Lrnx11 | 1 | 35383479 | QTL | learning-contextual 11 | ||
Eae30 | 1 | 27557285 | QTL | experimental allergic encephalomyelitis susceptibility 30 | ||
dde | 1 | 6427444 | heritable phenotypic marker | disproportionate dwarf and eye defect | ||
Cpgi348 | 1 | 774 | CpG island | CpG island 348 | ||
Tssr7272 | 1 | 3 | + | TSS region | transcription start site region 7272 | |
Tssr7273 | 1 | 11 | + | TSS region | transcription start site region 7273 | |
Atic | 1 | 22247 | + | protein coding gene | 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase | |
Tssr7274 | 1 | 72 | + | TSS region | transcription start site region 7274 | |
Tssr7275 | 1 | 13 | + | TSS region | transcription start site region 7275 | |
Tssr7276 | 1 | 11 | + | TSS region | transcription start site region 7276 | |
Fn1 | 1 | 67680 | - | protein coding gene | fibronectin 1 | |
Mol2 | 1 | 6620987 | QTL | modifier of LPS-response 2 | ||
Tssr12101 | 1 | 32 | - | TSS region | transcription start site region 12101 | |
Tssr12102 | 1 | 9 | - | TSS region | transcription start site region 12102 | |
Tssr12103 | 1 | 20 | - | TSS region | transcription start site region 12103 | |
Tssr12104 | 1 | 27 | - | TSS region | transcription start site region 12104 | |
Tssr12105 | 1 | 16 | - | TSS region | transcription start site region 12105 | |
Tssr12106 | 1 | 21 | - | TSS region | transcription start site region 12106 | |
Tssr12107 | 1 | 30 | - | TSS region | transcription start site region 12107 | |
Tssr12108 | 1 | 14 | - | TSS region | transcription start site region 12108 | |
Tssr12109 | 1 | 30 | - | TSS region | transcription start site region 12109 | |
Tssr12110 | 1 | 42 | - | TSS region | transcription start site region 12110 | |
Tssr12111 | 1 | 52 | - | TSS region | transcription start site region 12111 | |
Tssr12112 | 1 | 21 | - | TSS region | transcription start site region 12112 | |
Tssr12113 | 1 | 12 | - | TSS region | transcription start site region 12113 | |
Tssr12114 | 1 | 22 | - | TSS region | transcription start site region 12114 | |
Tssr12115 | 1 | 18 | - | TSS region | transcription start site region 12115 | |
Tssr12116 | 1 | 34 | - | TSS region | transcription start site region 12116 | |
Tssr12117 | 1 | 16 | - | TSS region | transcription start site region 12117 | |
Tssr12118 | 1 | 23 | - | TSS region | transcription start site region 12118 | |
Tssr12119 | 1 | 45 | - | TSS region | transcription start site region 12119 | |
Tssr12120 | 1 | 24 | - | TSS region | transcription start site region 12120 | |
Tssr12121 | 1 | 48 | - | TSS region | transcription start site region 12121 | |
Tssr7277 | 1 | 35 | + | TSS region | transcription start site region 7277 | |
Tssr12122 | 1 | 13 | - | TSS region | transcription start site region 12122 | |
Tssr12123 | 1 | 20 | - | TSS region | transcription start site region 12123 | |
Tssr12124 | 1 | 16 | - | TSS region | transcription start site region 12124 | |
Tssr12125 | 1 | 25 | - | TSS region | transcription start site region 12125 | |
Tssr12126 | 1 | 21 | - | TSS region | transcription start site region 12126 | |
Tssr12127 | 1 | 54 | - | TSS region | transcription start site region 12127 | |
Tssr12128 | 1 | 15 | - | TSS region | transcription start site region 12128 | |
Tssr12129 | 1 | 29 | - | TSS region | transcription start site region 12129 | |
Tssr12130 | 1 | 13 | - | TSS region | transcription start site region 12130 | |
Tssr12131 | 1 | 21 | - | TSS region | transcription start site region 12131 | |
Tssr12132 | 1 | 32 | - | TSS region | transcription start site region 12132 | |
Tssr12133 | 1 | 19 | - | TSS region | transcription start site region 12133 | |
Tssr12134 | 1 | 40 | - | TSS region | transcription start site region 12134 | |
Tssr12135 | 1 | 11 | - | TSS region | transcription start site region 12135 | |
Tssr12136 | 1 | 11 | - | TSS region | transcription start site region 12136 | |
Tssr12137 | 1 | 22 | - | TSS region | transcription start site region 12137 | |
Tssr12138 | 1 | 52 | - | TSS region | transcription start site region 12138 | |
Tssr12139 | 1 | 14 | - | TSS region | transcription start site region 12139 | |
Tssr12140 | 1 | 43 | - | TSS region | transcription start site region 12140 | |
Tssr12141 | 1 | 16 | - | TSS region | transcription start site region 12141 | |
Tssr12142 | 1 | 26 | - | TSS region | transcription start site region 12142 | |
Tssr7278 | 1 | 30 | + | TSS region | transcription start site region 7278 | |
Tssr12143 | 1 | 50 | - | TSS region | transcription start site region 12143 | |
Tssr12144 | 1 | 22 | - | TSS region | transcription start site region 12144 | |
Tssr7279 | 1 | 39 | + | TSS region | transcription start site region 7279 | |
Tssr12145 | 1 | 24 | - | TSS region | transcription start site region 12145 | |
Tssr12146 | 1 | 26 | - | TSS region | transcription start site region 12146 | |
Tssr7280 | 1 | 29 | + | TSS region | transcription start site region 7280 | |
Tssr12147 | 1 | 3 | - | TSS region | transcription start site region 12147 | |
Cpgi349 | 1 | 965 | CpG island | CpG island 349 | ||
Tssr12148 | 1 | 19 | - | TSS region | transcription start site region 12148 | |
Apol7d | 1 | 9508 | + | antisense lncRNA gene | apolipoprotein L 7d | |
Gm19003 | 1 | 1137 | + | pseudogene | predicted gene, 19003 | |
Gm46094 | 1 | 39380 | + | lncRNA gene | predicted gene, 46094 | |
D1Mit179 | 1 | 133 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 179 | ||
D1Mit127 | 1 | 132 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 127 | ||
Gm5829 | 1 | 350 | - | pseudogene | predicted gene 5829 | |
Gm5256 | 1 | 876 | - | pseudogene | predicted gene 5256 | |
Tssr7281 | 1 | 1 | + | TSS region | transcription start site region 7281 | |
Tssr7282 | 1 | 10 | + | TSS region | transcription start site region 7282 | |
Tssr7283 | 1 | 8 | + | TSS region | transcription start site region 7283 | |
Gm39660 | 1 | 12806 | - | lncRNA gene | predicted gene, 39660 | |
Gm30160 | 1 | 21267 | + | lncRNA gene | predicted gene, 30160 | |
Tssr12149 | 1 | 3 | - | TSS region | transcription start site region 12149 | |
Tssr7284 | 1 | 20 | + | TSS region | transcription start site region 7284 | |
Tssr12150 | 1 | 5 | - | TSS region | transcription start site region 12150 | |
D1Mit130 | 1 | 136 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 130 | ||
Gm30308 | 1 | 944 | + | lncRNA gene | predicted gene, 30308 | |
Gm45958 | 1 | 12521 | + | lncRNA gene | predicted gene, 45958 | |
Gm37217 | 1 | 3520 | - | unclassified gene | predicted gene, 37217 | |
Tssr7285 | 1 | 12 | + | TSS region | transcription start site region 7285 | |
Tssr7286 | 1 | 29 | + | TSS region | transcription start site region 7286 | |
Tssr7287 | 1 | 12 | + | TSS region | transcription start site region 7287 | |
Tssr7288 | 1 | 45 | + | TSS region | transcription start site region 7288 | |
Gm8883 | 1 | 3092 | + | lincRNA gene | predicted gene 8883 | |
Tssr7289 | 1 | 17 | + | TSS region | transcription start site region 7289 | |
Gm28818 | 1 | 4880 | - | lincRNA gene | predicted gene 28818 | |
Tssr12151 | 1 | 7 | - | TSS region | transcription start site region 12151 | |
Tssr7290 | 1 | 6 | + | TSS region | transcription start site region 7290 | |
Tssr12152 | 1 | 4 | - | TSS region | transcription start site region 12152 | |
4933417E11Rik | 1 | 46197 | - | lincRNA gene | RIKEN cDNA 4933417E11 gene | |
4930556G22Rik | 1 | 55050 | - | lincRNA gene | RIKEN cDNA 4930556G22 gene | |
Gm5528 | 1 | 479 | + | pseudogene | predicted gene 5528 | |
Tssr7291 | 1 | 20 | + | TSS region | transcription start site region 7291 | |
Tssr7292 | 1 | 4 | + | TSS region | transcription start site region 7292 | |
Gm8885 | 1 | 597 | + | pseudogene | predicted gene 8885 | |
Gm4319 | 1 | 14846 | - | lincRNA gene | predicted gene 4319 | |
Tssr12153 | 1 | 10 | - | TSS region | transcription start site region 12153 | |
Tssr12154 | 1 | 16 | - | TSS region | transcription start site region 12154 | |
Mreg | 1 | 52865 | - | protein coding gene | melanoregulin | |
Tssr12155 | 1 | 4 | - | TSS region | transcription start site region 12155 | |
Tssr12156 | 1 | 4 | - | TSS region | transcription start site region 12156 | |
Cpgi350 | 1 | 866 | CpG island | CpG island 350 | ||
Tssr12157 | 1 | 18 | - | TSS region | transcription start site region 12157 | |
Tssr12158 | 1 | 8 | - | TSS region | transcription start site region 12158 | |
Tssr12159 | 1 | 10 | - | TSS region | transcription start site region 12159 | |
Tssr7293 | 1 | 23 | + | TSS region | transcription start site region 7293 | |
Cpgi351 | 1 | 308 | CpG island | CpG island 351 | ||
Gm25360 | 1 | 190 | + | snRNA gene | predicted gene, 25360 | |
Tssr12160 | 1 | 24 | - | TSS region | transcription start site region 12160 | |
D230017M19Rik | 1 | 36329 | + | lincRNA gene | RIKEN cDNA D230017M19 gene | |
Cpgi352 | 1 | 464 | CpG island | CpG island 352 | ||
Tssr12161 | 1 | 45 | - | TSS region | transcription start site region 12161 | |
Tssr7294 | 1 | 48 | + | TSS region | transcription start site region 7294 | |
Tssr7295 | 1 | 25 | + | TSS region | transcription start site region 7295 | |
Tssr7296 | 1 | 10 | + | TSS region | transcription start site region 7296 | |
Gm23472 | 1 | 190 | + | snRNA gene | predicted gene, 23472 | |
Tssr7297 | 1 | 5 | + | TSS region | transcription start site region 7297 | |
Tssr12162 | 1 | 10 | - | TSS region | transcription start site region 12162 | |
Cpgi353 | 1 | 490 | CpG island | CpG island 353 | ||
Gm24497 | 1 | 190 | + | snRNA gene | predicted gene, 24497 | |
Cpgi354 | 1 | 270 | CpG island | CpG island 354 | ||
Gm25939 | 1 | 190 | + | snRNA gene | predicted gene, 25939 | |
Tssr12163 | 1 | 12 | - | TSS region | transcription start site region 12163 | |
Pecr | 1 | 25142 | - | protein coding gene | peroxisomal trans-2-enoyl-CoA reductase | |
Cpgi355 | 1 | 457 | CpG island | CpG island 355 | ||
Tssr12164 | 1 | 4 | - | TSS region | transcription start site region 12164 | |
Tssr12165 | 1 | 18 | - | TSS region | transcription start site region 12165 | |
Tssr114 | 1 | 7 | - | TSS region | transcription start site region 114 | |
Tssr115 | 1 | 5 | - | TSS region | transcription start site region 115 | |
Tssr116 | 1 | 8 | - | TSS region | transcription start site region 116 | |
Tssr7298 | 1 | 52 | + | TSS region | transcription start site region 7298 | |
Tmem169 | 1 | 18735 | + | protein coding gene | transmembrane protein 169 | |
Cpgi356 | 1 | 569 | CpG island | CpG island 356 | ||
Tssr7299 | 1 | 37 | + | TSS region | transcription start site region 7299 | |
Xrcc5 | 1 | 87531 | + | protein coding gene | X-ray repair complementing defective repair in Chinese hamster cells 5 | |
Tssr7300 | 1 | 17 | + | TSS region | transcription start site region 7300 | |
Tssr7301 | 1 | 11 | + | TSS region | transcription start site region 7301 | |
Tssr7302 | 1 | 25 | + | TSS region | transcription start site region 7302 | |
Tssr7303 | 1 | 14 | + | TSS region | transcription start site region 7303 | |
Tssr7304 | 1 | 17 | + | TSS region | transcription start site region 7304 | |
Gm39661 | 1 | 8198 | + | lncRNA gene | predicted gene, 39661 | |
March4 | 1 | 109475 | - | protein coding gene | membrane-associated ring finger (C3HC4) 4 | |
Tssr7305 | 1 | 5 | + | TSS region | transcription start site region 7305 | |
Gm15843 | 1 | 528 | + | pseudogene | predicted gene 15843 | |
Cpgi357 | 1 | 1230 | CpG island | CpG island 357 | ||
Tssr7306 | 1 | 25 | + | TSS region | transcription start site region 7306 | |
Tssr12166 | 1 | 15 | - | TSS region | transcription start site region 12166 | |
Tssr12167 | 1 | 14 | - | TSS region | transcription start site region 12167 | |
Tssr12168 | 1 | 24 | - | TSS region | transcription start site region 12168 | |
Tssr12169 | 1 | 14 | - | TSS region | transcription start site region 12169 | |
Tssr12170 | 1 | 47 | - | TSS region | transcription start site region 12170 | |
Tssr12171 | 1 | 23 | - | TSS region | transcription start site region 12171 | |
Cpgi358 | 1 | 316 | CpG island | CpG island 358 | ||
Tssr7307 | 1 | 37 | + | TSS region | transcription start site region 7307 | |
Smarcal1 | 1 | 49883 | + | protein coding gene | SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 | |
Tssr7308 | 1 | 7 | + | TSS region | transcription start site region 7308 | |
Cpgi359 | 1 | 711 | CpG island | CpG island 359 | ||
Gm39662 | 1 | 1775 | + | antisense lncRNA gene | predicted gene, 39662 | |
Ankar | 1 | 57584 | - | protein coding gene | ankyrin and armadillo repeat containing | |
D1Mit1009 | 1 | 199 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 1009 | ||
Gm18035 | 1 | 582 | + | pseudogene | predicted gene, 18035 | |
Tssr12172 | 1 | 11 | - | TSS region | transcription start site region 12172 | |
Tssr12173 | 1 | 12 | - | TSS region | transcription start site region 12173 | |
Tssr12174 | 1 | 26 | - | TSS region | transcription start site region 12174 | |
Gm45859 | 1 | 213 | - | pseudogene | predicted gene 45859 | |
Cpgi360 | 1 | 1144 | CpG island | CpG island 360 | ||
Tssr7309 | 1 | 14 | + | TSS region | transcription start site region 7309 | |
Tssr7310 | 1 | 37 | + | TSS region | transcription start site region 7310 | |
Rpl37a | 1 | 2523 | + | protein coding gene | ribosomal protein L37a | |
Tssr7311 | 1 | 9 | + | TSS region | transcription start site region 7311 | |
Gm39663 | 1 | 10826 | - | lncRNA gene | predicted gene, 39663 | |
Gm30788 | 1 | 25949 | - | lncRNA gene | predicted gene, 30788 | |
Gm30847 | 1 | 53300 | + | lncRNA gene | predicted gene, 30847 | |
Tssr12175 | 1 | 16 | - | TSS region | transcription start site region 12175 | |
Tssr12176 | 1 | 6 | - | TSS region | transcription start site region 12176 | |
Tssr12177 | 1 | 5 | - | TSS region | transcription start site region 12177 | |
Cpgi361 | 1 | 1632 | CpG island | CpG island 361 | ||
Tssr7312 | 1 | 19 | + | TSS region | transcription start site region 7312 | |
Igfbp2 | 1 | 27971 | + | protein coding gene | insulin-like growth factor binding protein 2 | |
Tssr7313 | 1 | 9 | + | TSS region | transcription start site region 7313 | |
Tssr7314 | 1 | 11 | + | TSS region | transcription start site region 7314 | |
Tssr7315 | 1 | 11 | + | TSS region | transcription start site region 7315 | |
Tssr7316 | 1 | 11 | + | TSS region | transcription start site region 7316 | |
Tssr7317 | 1 | 9 | + | TSS region | transcription start site region 7317 | |
Tssr7318 | 1 | 14 | + | TSS region | transcription start site region 7318 | |
Tssr7319 | 1 | 11 | + | TSS region | transcription start site region 7319 | |
Tssr7320 | 1 | 3 | + | TSS region | transcription start site region 7320 | |
Tssr7321 | 1 | 7 | + | TSS region | transcription start site region 7321 |