Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:71043090-71614910

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bard1 1 71027531 to 71103156 75625 - protein coding gene BRCA1 associated RING domain 1
Tssr12090 1 71048116 to 71048120 4 - TSS region transcription start site region 12090
Tssr12091 1 71068967 to 71068975 8 - TSS region transcription start site region 12091
Tssr12092 1 71101969 to 71101973 4 - TSS region transcription start site region 12092
Cpgi347 1 71102239 to 71103239 1000 CpG island CpG island 347
Tssr12093 1 71102901 to 71102979 78 - TSS region transcription start site region 12093
Gm8870 1 71155246 to 71156020 774 - pseudogene predicted gene 8870
Abca12 1 71243090 to 71414910 171820 - protein coding gene ATP-binding cassette, sub-family A (ABC1), member 12
Tssr12094 1 71307507 to 71307516 9 - TSS region transcription start site region 12094
Gm39659 1 71327290 to 71329244 1954 + lncRNA gene predicted gene, 39659
Tssr7271 1 71327300 to 71327317 17 + TSS region transcription start site region 7271
Tssr12095 1 71414803 to 71414815 12 - TSS region transcription start site region 12095
Tssr12096 1 71414818 to 71414829 11 - TSS region transcription start site region 12096
Tssr12097 1 71414840 to 71414872 32 - TSS region transcription start site region 12097
Tssr12098 1 71414881 to 71414915 34 - TSS region transcription start site region 12098
Tssr12099 1 71414922 to 71414927 5 - TSS region transcription start site region 12099
Tssr12100 1 71414930 to 71414941 11 - TSS region transcription start site region 12100
Gm6947 1 71493737 to 71493814 77 - pseudogene predicted gene 6947
Cpgi348 1 71556888 to 71557662 774 CpG island CpG island 348
Tssr7272 1 71557149 to 71557152 3 + TSS region transcription start site region 7272
Tssr7273 1 71557155 to 71557166 11 + TSS region transcription start site region 7273
Atic 1 71557156 to 71579403 22247 + protein coding gene 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase
Tssr7274 1 71557168 to 71557240 72 + TSS region transcription start site region 7274
Tssr7275 1 71564478 to 71564491 13 + TSS region transcription start site region 7275
Tssr7276 1 71578691 to 71578702 11 + TSS region transcription start site region 7276
Mol2 1 71585520 to 78206507 6620987 QTL modifier of LPS-response 2
Fn1 1 71585520 to 71653200 67680 - protein coding gene fibronectin 1
Tssr12101 1 71585558 to 71585590 32 - TSS region transcription start site region 12101
Tssr12102 1 71586224 to 71586233 9 - TSS region transcription start site region 12102
Tssr12103 1 71586926 to 71586946 20 - TSS region transcription start site region 12103
Tssr12104 1 71590812 to 71590839 27 - TSS region transcription start site region 12104
Tssr12105 1 71593121 to 71593137 16 - TSS region transcription start site region 12105
Tssr12106 1 71593138 to 71593159 21 - TSS region transcription start site region 12106
Tssr12107 1 71595724 to 71595754 30 - TSS region transcription start site region 12107
Tssr12108 1 71597437 to 71597451 14 - TSS region transcription start site region 12108
Tssr12109 1 71600337 to 71600367 30 - TSS region transcription start site region 12109
Tssr12110 1 71600415 to 71600457 42 - TSS region transcription start site region 12110
Tssr12111 1 71601242 to 71601294 52 - TSS region transcription start site region 12111
Tssr12112 1 71602381 to 71602402 21 - TSS region transcription start site region 12112
Tssr12113 1 71603841 to 71603853 12 - TSS region transcription start site region 12113
Tssr12114 1 71605964 to 71605986 22 - TSS region transcription start site region 12114
Tssr12115 1 71606783 to 71606801 18 - TSS region transcription start site region 12115
Tssr12116 1 71606816 to 71606850 34 - TSS region transcription start site region 12116
Tssr12117 1 71606857 to 71606873 16 - TSS region transcription start site region 12117
Tssr12118 1 71607978 to 71608001 23 - TSS region transcription start site region 12118
Tssr12119 1 71609503 to 71609548 45 - TSS region transcription start site region 12119
Tssr12120 1 71612501 to 71612525 24 - TSS region transcription start site region 12120
Tssr12121 1 71612557 to 71612605 48 - TSS region transcription start site region 12121