Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:7069406-7677869

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi20 1 7088385 to 7089443 1058 CpG island CpG island 20
Tssr10911 1 7088711 to 7088718 7 - TSS region transcription start site region 10911
Tssr10912 1 7088740 to 7088782 42 - TSS region transcription start site region 10912
Tssr5880 1 7088917 to 7088993 76 + TSS region transcription start site region 5880
Pcmtd1 1 7088920 to 7173628 84708 + protein coding gene protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
Tssr5881 1 7088998 to 7089077 79 + TSS region transcription start site region 5881
Tssr5882 1 7089101 to 7089117 16 + TSS region transcription start site region 5882
Tssr5883 1 7089130 to 7089178 48 + TSS region transcription start site region 5883
Tssr5884 1 7089187 to 7089200 13 + TSS region transcription start site region 5884
Tssr5885 1 7098126 to 7098131 5 + TSS region transcription start site region 5885
Tssr5886 1 7111646 to 7111660 14 + TSS region transcription start site region 5886
Tssr5887 1 7119819 to 7119825 6 + TSS region transcription start site region 5887
Tssr3 1 7130807 to 7130811 4 + TSS region transcription start site region 3
Gm26983 1 7136199 to 7136586 387 - pseudogene predicted gene, 26983
Tssr10913 1 7136613 to 7136616 3 - TSS region transcription start site region 10913
Gm38372 1 7148110 to 7152137 4027 + unclassified gene predicted gene, 38372
Tssr5888 1 7177671 to 7177679 8 + TSS region transcription start site region 5888
Gm9826 1 7177739 to 7179037 1298 + pseudogene predicted gene 9826
Nras-ps2 1 7189742 to 7189919 177 - pseudogene neuroblastoma ras oncogene, pseudogene 2
Tssr5889 1 7204211 to 7204213 2 + TSS region transcription start site region 5889
Gm23274 1 7265803 to 7265932 129 + snoRNA gene predicted gene, 23274
D1Mit428 1 7267494 to 7267606 112 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 428
D1Mit428.2 1 7267575 to 7267701 126 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 428.2
Gm19002 1 7315451 to 7316462 1011 + pseudogene predicted gene, 19002
Gm26901 1 7349406 to 7397869 48463 - lincRNA gene predicted gene, 26901
Tssr10914 1 7397072 to 7397076 4 - TSS region transcription start site region 10914
Cpgi21 1 7397680 to 7398709 1029 CpG island CpG island 21
Gm18984 1 7411181 to 7411996 815 + pseudogene predicted gene, 18984
Gm30414 1 7497968 to 7518149 20181 + lincRNA gene predicted gene, 30414
Gm37791 1 7591646 to 7591931 285 + pseudogene predicted gene, 37791
Gm7470 1 7597379 to 7599473 2094 + pseudogene predicted gene 7470
Rps2-ps2 1 7664081 to 7664961 880 + pseudogene ribosomal protein S2, pseudogene 2