Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:70053954-71083956

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Shali1 1 51924866 to 70367430 18442564 QTL survival time to hyperoxic acute lung injury 1
Spag16 1 69826970 to 70725132 898162 + protein coding gene sperm associated antigen 16
Gm28580 1 70067968 to 70068055 87 - pseudogene predicted gene 28580
D1Mit330 1 70135368 to 70135469 101 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 330
Tssr7267 1 70217302 to 70217305 3 + TSS region transcription start site region 7267
Tssr112 1 70220747 to 70220751 4 + TSS region transcription start site region 112
D1Mit381a 1 70257938 to 70258149 211 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 381a
D1Mit381b 1 70258026 to 70258149 123 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 381b
Gm38272 1 70310512 to 70312911 2399 - unclassified gene predicted gene, 38272
dde 1 70367239 to 76794683 6427444 heritable phenotypic marker disproportionate dwarf and eye defect
D1Mit251 1 70367239 to 70367430 191 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 251
D1Mit250 1 70469213 to 70469361 148 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 250
D1Mit481 1 70516467 to 70516584 117 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 481
Gm17972 1 70535545 to 70536179 634 + pseudogene predicted gene, 17972
Tssr113 1 70543193 to 70543195 2 + TSS region transcription start site region 113
Tssr7268 1 70568954 to 70568956 2 + TSS region transcription start site region 7268
Gm37456 1 70571435 to 70577271 5836 - unclassified gene predicted gene, 37456
D1Mit304 1 70592518 to 70592653 135 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 304
Gm23422 1 70596815 to 70596921 106 + snRNA gene predicted gene, 23422
Cpgi345 1 70725637 to 70725864 227 CpG island CpG island 345
Vwc2l 1 70725715 to 70885397 159682 + protein coding gene von Willebrand factor C domain-containing protein 2-like
Tssr7269 1 70725814 to 70725830 16 + TSS region transcription start site region 7269
Tssr7270 1 70725921 to 70725927 6 + TSS region transcription start site region 7270
Cpgi346 1 70839688 to 70839947 259 CpG island CpG island 346
Gm29906 1 70851015 to 70918626 67611 - lncRNA gene predicted gene, 29906
Gm8859 1 70906748 to 70908067 1319 + pseudogene predicted gene 8859
D1Mit78 1 70946366 to 70946564 198 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 78
Bard1 1 71027531 to 71103156 75625 - protein coding gene BRCA1 associated RING domain 1
Tssr12086 1 71028603 to 71028614 11 - TSS region transcription start site region 12086
Tssr12087 1 71028621 to 71028635 14 - TSS region transcription start site region 12087
Tssr12088 1 71029957 to 71029997 40 - TSS region transcription start site region 12088
Tssr12089 1 71030184 to 71030187 3 - TSS region transcription start site region 12089
Gm16236 1 71039652 to 71040030 378 - pseudogene predicted gene 16236
Tssr12090 1 71048116 to 71048120 4 - TSS region transcription start site region 12090
Tssr12091 1 71068967 to 71068975 8 - TSS region transcription start site region 12091