Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:69767938-70748149

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Shali1 1 51924866 to 70367430 18442564 QTL survival time to hyperoxic acute lung injury 1
Idd5.3 1 66484003 to 70037917 3553914 QTL insulin dependent diabetes susceptibility 5.3
Tssr12085 1 69768735 to 69768744 9 - TSS region transcription start site region 12085
Tssr7260 1 69769384 to 69769387 3 + TSS region transcription start site region 7260
Gm37930 1 69770868 to 69772753 1885 + unclassified gene predicted gene, 37930
Gm29822 1 69770874 to 69788525 17651 - lncRNA gene predicted gene, 29822
Cpgi344 1 69826802 to 69827318 516 CpG island CpG island 344
Tssr7261 1 69826865 to 69826915 50 + TSS region transcription start site region 7261
Tssr7262 1 69826957 to 69826984 27 + TSS region transcription start site region 7262
Spag16 1 69826970 to 70725132 898162 + protein coding gene sperm associated antigen 16
Tssr7263 1 69826986 to 69827003 17 + TSS region transcription start site region 7263
Tssr111 1 69871135 to 69871136 1 - TSS region transcription start site region 111
Tssr7264 1 69917063 to 69917070 7 + TSS region transcription start site region 7264
Gm22665 1 69921473 to 69921747 274 - unclassified non-coding RNA gene predicted gene, 22665
Tssr7265 1 69951611 to 69951635 24 + TSS region transcription start site region 7265
Tssr7266 1 69951641 to 69951647 6 + TSS region transcription start site region 7266
Gm23879 1 69955004 to 69955129 125 - snRNA gene predicted gene, 23879
Gm28580 1 70067968 to 70068055 87 - pseudogene predicted gene 28580
D1Mit330 1 70135368 to 70135469 101 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 330
Tssr7267 1 70217302 to 70217305 3 + TSS region transcription start site region 7267
Tssr112 1 70220747 to 70220751 4 + TSS region transcription start site region 112
D1Mit381a 1 70257938 to 70258149 211 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 381a
D1Mit381b 1 70258026 to 70258149 123 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 381b
Gm38272 1 70310512 to 70312911 2399 - unclassified gene predicted gene, 38272
dde 1 70367239 to 76794683 6427444 heritable phenotypic marker disproportionate dwarf and eye defect
D1Mit251 1 70367239 to 70367430 191 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 251
D1Mit250 1 70469213 to 70469361 148 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 250
D1Mit481 1 70516467 to 70516584 117 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 481
Gm17972 1 70535545 to 70536179 634 + pseudogene predicted gene, 17972
Tssr113 1 70543193 to 70543195 2 + TSS region transcription start site region 113
Tssr7268 1 70568954 to 70568956 2 + TSS region transcription start site region 7268
Gm37456 1 70571435 to 70577271 5836 - unclassified gene predicted gene, 37456
D1Mit304 1 70592518 to 70592653 135 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 304
Gm23422 1 70596815 to 70596921 106 + snRNA gene predicted gene, 23422
Cpgi345 1 70725637 to 70725864 227 CpG island CpG island 345
Vwc2l 1 70725715 to 70885397 159682 + protein coding gene von Willebrand factor C domain-containing protein 2-like
Tssr7269 1 70725814 to 70725830 16 + TSS region transcription start site region 7269
Tssr7270 1 70725921 to 70725927 6 + TSS region transcription start site region 7270