Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:69092321-69663071

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Erbb4 1 68032186 to 69108059 1075873 - protein coding gene erb-b2 receptor tyrosine kinase 4
Gm16076 1 69091913 to 69106740 14827 - sense intronic lncRNA gene predicted gene 16076
Tssr12050 1 69097005 to 69097006 1 - TSS region transcription start site region 12050
Tssr12051 1 69103176 to 69103180 4 - TSS region transcription start site region 12051
Cpgi341 1 69106096 to 69108381 2285 CpG island CpG island 341
Tssr12052 1 69108039 to 69108064 25 - TSS region transcription start site region 12052
Tssr12053 1 69108258 to 69108275 17 - TSS region transcription start site region 12053
Tssr12054 1 69108418 to 69108460 42 - TSS region transcription start site region 12054
Tssr12055 1 69108535 to 69108577 42 - TSS region transcription start site region 12055
Gm8840 1 69130914 to 69131299 385 - pseudogene predicted gene 8840
Tssr12056 1 69131331 to 69131338 7 - TSS region transcription start site region 12056
Cpgi342 1 69376935 to 69378353 1418 CpG island CpG island 342
Pced1c-ps 1 69377321 to 69378071 750 + pseudogene PC-esterase domain containing 1C, pseudogene
Gm28497 1 69441056 to 69444084 3028 + lincRNA gene predicted gene 28497
Gm29113 1 69490357 to 69493788 3431 - lincRNA gene predicted gene 29113
Gm29114 1 69513932 to 69547707 33775 + antisense lncRNA gene predicted gene 29114
Ikzf2 1 69531214 to 69687245 156031 - protein coding gene IKAROS family zinc finger 2
Tssr12057 1 69537200 to 69537209 9 - TSS region transcription start site region 12057
Tssr12058 1 69541316 to 69541343 27 - TSS region transcription start site region 12058
Tssr12059 1 69541370 to 69541382 12 - TSS region transcription start site region 12059
Tssr12060 1 69547877 to 69547890 13 - TSS region transcription start site region 12060
Tssr12061 1 69548717 to 69548726 9 - TSS region transcription start site region 12061
Tssr12062 1 69548786 to 69548792 6 - TSS region transcription start site region 12062
Tssr12063 1 69548941 to 69548944 3 - TSS region transcription start site region 12063
Tssr12064 1 69548980 to 69549014 34 - TSS region transcription start site region 12064
Gm29112 1 69595036 to 69598522 3486 - sense intronic lncRNA gene predicted gene 29112
Tssr7256 1 69600557 to 69600559 2 + TSS region transcription start site region 7256
Tssr12065 1 69649444 to 69649449 5 - TSS region transcription start site region 12065
Gm28112 1 69660187 to 69662061 1874 - sense intronic lncRNA gene predicted gene 28112
Tssr12066 1 69662789 to 69662793 4 - TSS region transcription start site region 12066