Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:6681559-7158588

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
St18 1 6487231 to 6860940 373709 + protein coding gene suppression of tumorigenicity 18
Tssr5869 1 6707861 to 6707878 17 + TSS region transcription start site region 5869
Tssr5870 1 6730105 to 6730117 12 + TSS region transcription start site region 5870
Tssr5871 1 6730124 to 6730134 10 + TSS region transcription start site region 5871
Tssr5872 1 6730135 to 6730151 16 + TSS region transcription start site region 5872
Tssr5873 1 6734827 to 6734874 47 + TSS region transcription start site region 5873
Tssr5874 1 6734902 to 6734926 24 + TSS region transcription start site region 5874
Tssr5875 1 6749237 to 6749238 1 + TSS region transcription start site region 5875
Tssr5876 1 6842004 to 6842028 24 + TSS region transcription start site region 5876
Gm42492 1 6861237 to 6864151 2914 - unclassified gene predicted gene 42492
Gm7449 1 6910560 to 6911222 662 + pseudogene predicted gene 7449
Tssr5877 1 6916534 to 6916536 2 + TSS region transcription start site region 5877
Gm37108 1 6916559 to 6923588 7029 + pseudogene predicted gene, 37108
Gm37275 1 6929759 to 6929788 29 + pseudogene predicted gene, 37275
Tssr5878 1 6995220 to 6995221 1 + TSS region transcription start site region 5878
Gm37225 1 6998217 to 6998541 324 + pseudogene predicted gene, 37225
Gm37489 1 7013762 to 7013920 158 + pseudogene predicted gene, 37489
Gm5694 1 7035915 to 7037217 1302 + pseudogene predicted gene 5694
Tssr5879 1 7068363 to 7068364 1 + TSS region transcription start site region 5879
Cpgi20 1 7088385 to 7089443 1058 CpG island CpG island 20
Tssr10911 1 7088711 to 7088718 7 - TSS region transcription start site region 10911
Tssr10912 1 7088740 to 7088782 42 - TSS region transcription start site region 10912
Tssr5880 1 7088917 to 7088993 76 + TSS region transcription start site region 5880
Pcmtd1 1 7088920 to 7173628 84708 + protein coding gene protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
Tssr5881 1 7088998 to 7089077 79 + TSS region transcription start site region 5881
Tssr5882 1 7089101 to 7089117 16 + TSS region transcription start site region 5882
Tssr5883 1 7089130 to 7089178 48 + TSS region transcription start site region 5883
Tssr5884 1 7089187 to 7089200 13 + TSS region transcription start site region 5884
Tssr5885 1 7098126 to 7098131 5 + TSS region transcription start site region 5885
Tssr5886 1 7111646 to 7111660 14 + TSS region transcription start site region 5886
Tssr5887 1 7119819 to 7119825 6 + TSS region transcription start site region 5887
Tssr3 1 7130807 to 7130811 4 + TSS region transcription start site region 3
Gm26983 1 7136199 to 7136586 387 - pseudogene predicted gene, 26983
Tssr10913 1 7136613 to 7136616 3 - TSS region transcription start site region 10913
Gm38372 1 7148110 to 7152137 4027 + unclassified gene predicted gene, 38372