Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:66469712-66833317

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Unc80 1 66468367 to 66699148 230781 + protein coding gene unc-80, NALCN activator
Tssr7168 1 66472059 to 66472080 21 + TSS region transcription start site region 7168
Idd5.3 1 66484003 to 70037917 3553914 QTL insulin dependent diabetes susceptibility 5.3
Gm39655 1 66649712 to 66653295 3583 - lncRNA gene predicted gene, 39655
Gm37181 1 66690630 to 66692356 1726 - unclassified gene predicted gene, 37181
Tssr7169 1 66696694 to 66696715 21 + TSS region transcription start site region 7169
A030001O10Rik 1 66696997 to 66699865 2868 unclassified gene RIKEN cDNA A030001O10 gene
Cpgi337 1 66700653 to 66701552 899 CpG island CpG island 337
Rpe 1 66700831 to 66719805 18974 + protein coding gene ribulose-5-phosphate-3-epimerase
Tssr7170 1 66700852 to 66700859 7 + TSS region transcription start site region 7170
Tssr7171 1 66700862 to 66700875 13 + TSS region transcription start site region 7171
Tssr7172 1 66700876 to 66700898 22 + TSS region transcription start site region 7172
Tssr7173 1 66705174 to 66705180 6 + TSS region transcription start site region 7173
Kansl1l 1 66719248 to 66817562 98314 - protein coding gene KAT8 regulatory NSL complex subunit 1-like
Gm46093 1 66738220 to 66762014 23794 + lncRNA gene predicted gene, 46093
2810488O17Rik 1 66757393 to 66758374 981 unclassified gene RIKEN cDNA 2810488O17 gene
Tssr11997 1 66765084 to 66765087 3 - TSS region transcription start site region 11997
Gm37570 1 66765626 to 66768731 3105 - unclassified gene predicted gene, 37570
Tssr11998 1 66765709 to 66765728 19 - TSS region transcription start site region 11998
Gm38387 1 66769290 to 66771866 2576 - unclassified gene predicted gene, 38387
Gm38162 1 66775511 to 66780107 4596 + unclassified gene predicted gene, 38162
Gm39656 1 66779633 to 66793287 13654 + lncRNA gene predicted gene, 39656
Tssr11999 1 66782239 to 66782243 4 - TSS region transcription start site region 11999
Gm15789 1 66783913 to 66786445 2532 + pseudogene predicted gene 15789
6820402A03Rik 1 66793645 to 66796298 2653 - unclassified gene RIKEN cDNA 6820402A03 gene
Gm37285 1 66799659 to 66800797 1138 - unclassified gene predicted gene, 37285
Gm37755 1 66812315 to 66814493 2178 + unclassified gene predicted gene, 37755
Tssr12000 1 66815874 to 66815883 9 - TSS region transcription start site region 12000
Tssr12001 1 66815927 to 66815954 27 - TSS region transcription start site region 12001
Tssr105 1 66816032 to 66816048 16 - TSS region transcription start site region 105
Tssr7174 1 66816128 to 66816147 19 + TSS region transcription start site region 7174
Tssr7175 1 66816207 to 66816219 12 + TSS region transcription start site region 7175
Cpgi338 1 66816252 to 66818238 1986 CpG island CpG island 338
Tssr7176 1 66816457 to 66816461 4 + TSS region transcription start site region 7176
Tssr12002 1 66816885 to 66816922 37 - TSS region transcription start site region 12002
Tssr12003 1 66816935 to 66816968 33 - TSS region transcription start site region 12003
Tssr12004 1 66817536 to 66817600 64 - TSS region transcription start site region 12004
Tssr12005 1 66817601 to 66817617 16 - TSS region transcription start site region 12005
Gm38218 1 66821226 to 66825914 4688 - unclassified gene predicted gene, 38218
Acadl 1 66830839 to 66863277 32438 - protein coding gene acyl-Coenzyme A dehydrogenase, long-chain