Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:65102056-65569244

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cryga 1 65100389 to 65103363 2974 - protein coding gene crystallin, gamma A
Gm28845 1 65100619 to 65119558 18939 - protein coding gene predicted gene 28845
Cpgi330 1 65102948 to 65103274 326 CpG island CpG island 330
Tssr11973 1 65103007 to 65103023 16 - TSS region transcription start site region 11973
Tssr7119 1 65103046 to 65103065 19 + TSS region transcription start site region 7119
Tssr11974 1 65103082 to 65103100 18 - TSS region transcription start site region 11974
Tssr11975 1 65103149 to 65103172 23 - TSS region transcription start site region 11975
Tssr11976 1 65103363 to 65103378 15 - TSS region transcription start site region 11976
D630023F18Rik 1 65105285 to 65123214 17929 - protein coding gene RIKEN cDNA D630023F18 gene
Cpgi331 1 65109817 to 65110165 348 CpG island CpG island 331
Tssr11977 1 65109824 to 65109832 8 - TSS region transcription start site region 11977
Tssr11978 1 65110086 to 65110094 8 - TSS region transcription start site region 11978
Tssr11979 1 65110101 to 65110108 7 - TSS region transcription start site region 11979
Tssr11980 1 65110130 to 65110166 36 - TSS region transcription start site region 11980
Tssr11981 1 65110189 to 65110274 85 - TSS region transcription start site region 11981
Tssr7120 1 65110297 to 65110304 7 + TSS region transcription start site region 7120
Gm36358 1 65110866 to 65119014 8148 + lncRNA gene predicted gene, 36358
Tssr11982 1 65113535 to 65113537 2 - TSS region transcription start site region 11982
Tssr103 1 65122079 to 65122083 4 + TSS region transcription start site region 103
Tssr11983 1 65123097 to 65123104 7 - TSS region transcription start site region 11983
Tssr11984 1 65123108 to 65123193 85 - TSS region transcription start site region 11984
Tssr11985 1 65123308 to 65123321 13 - TSS region transcription start site region 11985
Idh1 1 65158616 to 65186479 27863 - protein coding gene isocitrate dehydrogenase 1 (NADP+), soluble
Tssr11986 1 65159040 to 65159056 16 - TSS region transcription start site region 11986
Tssr11987 1 65159387 to 65159397 10 - TSS region transcription start site region 11987
Tssr11988 1 65161082 to 65161103 21 - TSS region transcription start site region 11988
Tssr11989 1 65175133 to 65175140 7 - TSS region transcription start site region 11989
Cpgi332 1 65178686 to 65179484 798 CpG island CpG island 332
Tssr11990 1 65179044 to 65179055 11 - TSS region transcription start site region 11990
Tssr11991 1 65179058 to 65179121 63 - TSS region transcription start site region 11991
Tssr11992 1 65184114 to 65184118 4 - TSS region transcription start site region 11992
Cpgi333 1 65186247 to 65187147 900 CpG island CpG island 333
Tssr11993 1 65186396 to 65186409 13 - TSS region transcription start site region 11993
Tssr11994 1 65186414 to 65186426 12 - TSS region transcription start site region 11994
Tssr11995 1 65186456 to 65186504 48 - TSS region transcription start site region 11995
Tssr7121 1 65186660 to 65186674 14 + TSS region transcription start site region 7121
Tssr7122 1 65186675 to 65186722 47 + TSS region transcription start site region 7122
Pikfyve 1 65186683 to 65278695 92012 + protein coding gene phosphoinositide kinase, FYVE type zinc finger containing
Tssr7123 1 65186727 to 65186738 11 + TSS region transcription start site region 7123
Tssr7124 1 65230773 to 65230802 29 + TSS region transcription start site region 7124
Tssr7125 1 65247180 to 65247190 10 + TSS region transcription start site region 7125
Tssr7126 1 65247409 to 65247433 24 + TSS region transcription start site region 7126
D1Mit327 1 65265339 to 65265478 139 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 327
Pth2r 1 65282056 to 65389244 107188 + protein coding gene parathyroid hormone 2 receptor
D1Mit1000 1 65309031 to 65309157 126 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 1000
Cpgi334 1 65311225 to 65311764 539 CpG island CpG island 334
Tssr7127 1 65311453 to 65311457 4 + TSS region transcription start site region 7127
Gm28927 1 65420850 to 65421121 271 - pseudogene predicted gene 28927
Gm28926 1 65421124 to 65421803 679 - pseudogene predicted gene 28926
Gm28925 1 65421770 to 65421937 167 - pseudogene predicted gene 28925
Gm28923 1 65438664 to 65438985 321 - pseudogene predicted gene 28923
Gm28922 1 65470201 to 65470508 307 - pseudogene predicted gene 28922
Gm28728 1 65523671 to 65524075 404 - pseudogene predicted gene 28728
Gm5255 1 65550467 to 65551173 706 - pseudogene predicted gene 5255
Gm8805 1 65552682 to 65552994 312 + pseudogene predicted gene 8805