Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:64816425-65096887

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plekhm3 1 64789120 to 64956824 167704 - protein coding gene pleckstrin homology domain containing, family M, member 3
Tssr11936 1 64816675 to 64816690 15 - TSS region transcription start site region 11936
D1Mit325 1 64854711 to 64854881 170 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 325
Tssr11937 1 64924943 to 64924950 7 - TSS region transcription start site region 11937
Tssr11938 1 64927499 to 64927540 41 - TSS region transcription start site region 11938
Tssr7101 1 64927712 to 64927723 11 + TSS region transcription start site region 7101
Tssr7102 1 64927726 to 64927743 17 + TSS region transcription start site region 7102
Tssr11939 1 64928061 to 64928066 5 - TSS region transcription start site region 11939
Tssr11940 1 64928076 to 64928096 20 - TSS region transcription start site region 11940
Tssr11941 1 64928112 to 64928115 3 - TSS region transcription start site region 11941
Tssr11942 1 64928642 to 64928646 4 - TSS region transcription start site region 11942
Rpl31-ps24 1 64934401 to 64934779 378 + pseudogene ribosomal protein L31, pseudogene 24
Tssr11943 1 64937808 to 64937821 13 - TSS region transcription start site region 11943
Tssr11944 1 64937824 to 64937836 12 - TSS region transcription start site region 11944
Cpgi329 1 64956425 to 64956887 462 CpG island CpG island 329
Tssr11945 1 64956711 to 64956725 14 - TSS region transcription start site region 11945
Tssr11946 1 64956731 to 64956782 51 - TSS region transcription start site region 11946
Tssr11947 1 64956807 to 64956818 11 - TSS region transcription start site region 11947
Tssr11948 1 64956823 to 64956835 12 - TSS region transcription start site region 11948
Rpl10a-ps1 1 64993951 to 64994604 653 - pseudogene ribosomal protein L10A, pseudogene 1
Tssr7103 1 64994271 to 64994311 40 + TSS region transcription start site region 7103
Tssr11949 1 64994633 to 64994640 7 - TSS region transcription start site region 11949
Gm24788 1 65001307 to 65001462 155 - snRNA gene predicted gene, 24788
Akr1cl 1 65013078 to 65032759 19681 - protein coding gene aldo-keto reductase family 1, member C-like
Tssr11950 1 65018425 to 65018432 7 - TSS region transcription start site region 11950
Tssr7104 1 65028057 to 65028061 4 + TSS region transcription start site region 7104
Gm8550 1 65028080 to 65028732 652 + pseudogene predicted gene 8550
Tssr7105 1 65029828 to 65029841 13 + TSS region transcription start site region 7105
Tssr11951 1 65030330 to 65030333 3 - TSS region transcription start site region 11951
Tssr11952 1 65032738 to 65032754 16 - TSS region transcription start site region 11952
Tssr7106 1 65043785 to 65043789 4 + TSS region transcription start site region 7106
Cryge 1 65048554 to 65051149 2595 - protein coding gene crystallin, gamma E
Tssr7107 1 65048558 to 65048560 2 + TSS region transcription start site region 7107
Tssr11953 1 65048581 to 65048598 17 - TSS region transcription start site region 11953
Tssr11954 1 65048647 to 65048652 5 - TSS region transcription start site region 11954
Tssr99 1 65048848 to 65048858 10 + TSS region transcription start site region 99
Tssr11955 1 65051148 to 65051150 2 - TSS region transcription start site region 11955
Tssr11956 1 65051231 to 65051241 10 - TSS region transcription start site region 11956
Tssr100 1 65061843 to 65061844 1 + TSS region transcription start site region 100
Crygd 1 65061872 to 65063452 1580 - protein coding gene crystallin, gamma D
Tssr11957 1 65061890 to 65061901 11 - TSS region transcription start site region 11957
Tssr11958 1 65061921 to 65061926 5 - TSS region transcription start site region 11958
Tssr7108 1 65061998 to 65062014 16 + TSS region transcription start site region 7108
Tssr11959 1 65062098 to 65062118 20 - TSS region transcription start site region 11959
Tssr11960 1 65062183 to 65062194 11 - TSS region transcription start site region 11960
Tssr11961 1 65063437 to 65063440 3 - TSS region transcription start site region 11961
Crygc 1 65071525 to 65073532 2007 - protein coding gene crystallin, gamma C
Tssr11962 1 65071568 to 65071578 10 - TSS region transcription start site region 11962
Tssr11963 1 65071609 to 65071616 7 - TSS region transcription start site region 11963
Tssr11964 1 65073527 to 65073537 10 - TSS region transcription start site region 11964
Crygb 1 65080222 to 65082290 2068 - protein coding gene crystallin, gamma B
Tssr7109 1 65080228 to 65080246 18 + TSS region transcription start site region 7109
Tssr11965 1 65080253 to 65080260 7 - TSS region transcription start site region 11965
Tssr11966 1 65080276 to 65080287 11 - TSS region transcription start site region 11966
Tssr101 1 65080376 to 65080415 39 + TSS region transcription start site region 101
Tssr7110 1 65080520 to 65080525 5 + TSS region transcription start site region 7110
Tssr7111 1 65080526 to 65080543 17 + TSS region transcription start site region 7111
Tssr11967 1 65082284 to 65082299 15 - TSS region transcription start site region 11967
Gm7329 1 65095227 to 65095436 209 + pseudogene predicted gene 7329