Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 1:64739120-65006824

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28 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm38058 1 64736240 to 64740607 4367 + protein coding gene predicted gene, 38058
Plekhm3 1 64789120 to 64956824 167704 - protein coding gene pleckstrin homology domain containing, family M, member 3
Gm18633 1 64799128 to 64800123 995 + pseudogene predicted gene, 18633
Tssr11935 1 64812966 to 64812993 27 - TSS region transcription start site region 11935
Tssr11936 1 64816675 to 64816690 15 - TSS region transcription start site region 11936
D1Mit325 1 64854711 to 64854881 170 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 325
Gm51628 1 64886854 to 64896728 9874 + lncRNA gene predicted gene, 51628
Tssr11937 1 64924943 to 64924950 7 - TSS region transcription start site region 11937
Tssr11938 1 64927499 to 64927540 41 - TSS region transcription start site region 11938
Tssr7101 1 64927712 to 64927723 11 + TSS region transcription start site region 7101
Tssr7102 1 64927726 to 64927743 17 + TSS region transcription start site region 7102
Tssr11939 1 64928061 to 64928066 5 - TSS region transcription start site region 11939
Tssr11940 1 64928076 to 64928096 20 - TSS region transcription start site region 11940
Tssr11941 1 64928112 to 64928115 3 - TSS region transcription start site region 11941
Tssr11942 1 64928642 to 64928646 4 - TSS region transcription start site region 11942
Rpl31-ps24 1 64934401 to 64934779 378 + pseudogene ribosomal protein L31, pseudogene 24
Tssr11943 1 64937808 to 64937821 13 - TSS region transcription start site region 11943
Tssr11944 1 64937824 to 64937836 12 - TSS region transcription start site region 11944
Gm51627 1 64954724 to 64961820 7096 + protein coding gene predicted gene, 51627
Cpgi329 1 64956425 to 64956887 462 CpG island CpG island 329
Tssr11945 1 64956711 to 64956725 14 - TSS region transcription start site region 11945
Tssr11946 1 64956731 to 64956782 51 - TSS region transcription start site region 11946
Tssr11947 1 64956807 to 64956818 11 - TSS region transcription start site region 11947
Tssr11948 1 64956823 to 64956835 12 - TSS region transcription start site region 11948
Rpl10a-ps1 1 64993951 to 64994604 653 - pseudogene ribosomal protein L10A, pseudogene 1
Tssr7103 1 64994271 to 64994311 40 + TSS region transcription start site region 7103
Tssr11949 1 64994633 to 64994640 7 - TSS region transcription start site region 11949
Gm24788 1 65001307 to 65001462 155 - snRNA gene predicted gene, 24788