Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:64412794-64724548

37 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm28980	1	64454359 to 64454577	218	-	pseudogene	predicted gene 28980
Gm36148	1	64516797 to 64521354	4557	+	lncRNA gene	predicted gene, 36148
Tssr11920	1	64527783 to 64527788	5	-	TSS region	transcription start site region 11920
Tssr11921	1	64528321 to 64528326	5	-	TSS region	transcription start site region 11921
Cpgi325	1	64531890 to 64533758	1868		CpG island	CpG island 325
Tssr7087	1	64532052 to 64532070	18	+	TSS region	transcription start site region 7087
Tssr11922	1	64532403 to 64532411	8	-	TSS region	transcription start site region 11922
Tssr11923	1	64532420 to 64532439	19	-	TSS region	transcription start site region 11923
Tssr7088	1	64532571 to 64532594	23	+	TSS region	transcription start site region 7088
Tssr7089	1	64532610 to 64532620	10	+	TSS region	transcription start site region 7089
Creb1	1	64532645 to 64604548	71903	+	protein coding gene	cAMP responsive element binding protein 1
Tssr98	1	64532671 to 64532720	49	-	TSS region	transcription start site region 98
Tssr7090	1	64532790 to 64532815	25	+	TSS region	transcription start site region 7090
Tssr7091	1	64532820 to 64532859	39	+	TSS region	transcription start site region 7091
Tssr11924	1	64532862 to 64532903	41	-	TSS region	transcription start site region 11924
Tssr7092	1	64532866 to 64532877	11	+	TSS region	transcription start site region 7092
Tssr7093	1	64532891 to 64532900	9	+	TSS region	transcription start site region 7093
Tssr7094	1	64532981 to 64532996	15	+	TSS region	transcription start site region 7094
Tssr7095	1	64533126 to 64533145	19	+	TSS region	transcription start site region 7095
Mettl21a	1	64606473 to 64617242	10769	-	protein coding gene	methyltransferase like 21A
Cpgi326	1	64616830 to 64617870	1040		CpG island	CpG island 326
Tssr11925	1	64617153 to 64617238	85	-	TSS region	transcription start site region 11925
Gm28982	1	64617784 to 64626033	8249	+	lincRNA gene	predicted gene 28982
BC019684	1	64620524 to 64622772	2248		unclassified gene	cDNA sequence BC019684
Gm29152	1	64649935 to 64652756	2821	+	lincRNA gene	predicted gene 29152
2810408I11Rik	1	64679871 to 64690659	10788	-	lncRNA gene	RIKEN cDNA 2810408I11 gene
Cpgi327	1	64690211 to 64691697	1486		CpG island	CpG island 327
Tssr7096	1	64690366 to 64690371	5	+	TSS region	transcription start site region 7096
Tssr7097	1	64690443 to 64690467	24	+	TSS region	transcription start site region 7097
Tssr11926	1	64690578 to 64690587	9	-	TSS region	transcription start site region 11926
Tssr11927	1	64690618 to 64690638	20	-	TSS region	transcription start site region 11927
Tssr11928	1	64690650 to 64690666	16	-	TSS region	transcription start site region 11928
Tssr7098	1	64690791 to 64690803	12	+	TSS region	transcription start site region 7098
Tssr7099	1	64690867 to 64690872	5	+	TSS region	transcription start site region 7099
Tssr7100	1	64690913 to 64690933	20	+	TSS region	transcription start site region 7100
Tssr11929	1	64691036 to 64691068	32	-	TSS region	transcription start site region 11929
Ccnyl1	1	64691041 to 64725646	34605	+	protein coding gene	cyclin Y-like 1