MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 1:63213226-63333363

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gpr1	1	63182691 to 63214543	31852	-	protein coding gene	G protein-coupled receptor 1
Tssr11885	1	63214226 to 63214244	18	-	TSS region	transcription start site region 11885
Tssr11886	1	63214247 to 63214264	17	-	TSS region	transcription start site region 11886
Tssr11887	1	63214275 to 63214286	11	-	TSS region	transcription start site region 11887
Tssr11888	1	63214309 to 63214322	13	-	TSS region	transcription start site region 11888
1700039I01Rik	1	63248021 to 63248499	478	-	lncRNA gene	RIKEN cDNA 1700039I01 gene
Cpgi315	1	63248104 to 63248795	691		CpG island	CpG island 315
Gm11608	1	63266848 to 63273120	6272	-	lincRNA gene	predicted gene 11608
Cpgi316	1	63272786 to 63274030	1244		CpG island	CpG island 316
Tssr11889	1	63273096 to 63273111	15	-	TSS region	transcription start site region 11889
Tssr11890	1	63273112 to 63273136	24	-	TSS region	transcription start site region 11890
Tssr7063	1	63273203 to 63273230	27	+	TSS region	transcription start site region 7063
Gm24513	1	63273226 to 63273363	137	-	miRNA gene	predicted gene, 24513
Tssr7064	1	63273261 to 63273275	14	+	TSS region	transcription start site region 7064
Zdbf2	1	63273265 to 63314576	41311	+	protein coding gene	zinc finger, DBF-type containing 2
Tssr7065	1	63296207 to 63296212	5	+	TSS region	transcription start site region 7065
Gm23448	1	63300280 to 63300383	103	-	snRNA gene	predicted gene, 23448
Cpgi317	1	63309067 to 63309968	901		CpG island	CpG island 317
Tssr7066	1	63323944 to 63323962	18	+	TSS region	transcription start site region 7066