Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:63126818-63226919

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ino80dos 1 63114471 to 63158295 43824 + lincRNA gene INO80 complex subunit D, opposite strand
Gm20342 1 63117118 to 63126837 9719 + lincRNA gene predicted gene, 20342
Ndufs1 1 63143592 to 63176822 33230 - protein coding gene NADH:ubiquinone oxidoreductase core subunit S1
Gm24557 1 63161855 to 63161943 88 + miRNA gene predicted gene, 24557
Cpgi313 1 63176462 to 63177546 1084 CpG island CpG island 313
Tssr11882 1 63176653 to 63176707 54 - TSS region transcription start site region 11882
Tssr11883 1 63176805 to 63176817 12 - TSS region transcription start site region 11883
Tssr7054 1 63176818 to 63176919 101 + TSS region transcription start site region 7054
Eef1b2 1 63176831 to 63180486 3655 + protein coding gene eukaryotic translation elongation factor 1 beta 2
Tssr7055 1 63177051 to 63177054 3 + TSS region transcription start site region 7055
Tssr7056 1 63177091 to 63177096 5 + TSS region transcription start site region 7056
Tssr7057 1 63177119 to 63177145 26 + TSS region transcription start site region 7057
Tssr7058 1 63177746 to 63177760 14 + TSS region transcription start site region 7058
Gm27390 1 63177983 to 63178158 175 + unclassified non-coding RNA gene predicted gene, 27390
Tssr7059 1 63178460 to 63178480 20 + TSS region transcription start site region 7059
Gm26457 1 63178686 to 63178720 34 + snoRNA gene predicted gene, 26457
Tssr11884 1 63178858 to 63178896 38 - TSS region transcription start site region 11884
Snora41 1 63179023 to 63179135 112 + snoRNA gene small nucleolar RNA, H/ACA box 41
Gpr1 1 63182691 to 63214543 31852 - protein coding gene G protein-coupled receptor 1
Gm27512 1 63198031 to 63198156 125 + miRNA gene predicted gene, 27512
Cpgi314 1 63200183 to 63200626 443 CpG island CpG island 314
Platr12 1 63200313 to 63207967 7654 + unclassified non-coding RNA gene pluripotency associated transcript 12
Tssr7060 1 63200567 to 63200578 11 + TSS region transcription start site region 7060
Tssr7061 1 63200581 to 63200592 11 + TSS region transcription start site region 7061
Tssr7062 1 63200593 to 63200641 48 + TSS region transcription start site region 7062
Tssr11885 1 63214226 to 63214244 18 - TSS region transcription start site region 11885
Tssr11886 1 63214247 to 63214264 17 - TSS region transcription start site region 11886
Tssr11887 1 63214275 to 63214286 11 - TSS region transcription start site region 11887
Tssr11888 1 63214309 to 63214322 13 - TSS region transcription start site region 11888