Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:63094471-63178295

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ino80d 1 63047801 to 63114267 66466 - protein coding gene INO80 complex subunit D
Tssr11878 1 63095996 to 63096000 4 - TSS region transcription start site region 11878
Tssr7048 1 63103149 to 63103150 1 + TSS region transcription start site region 7048
Tssr11879 1 63108028 to 63108032 4 - TSS region transcription start site region 11879
Tssr7049 1 63113115 to 63113131 16 + TSS region transcription start site region 7049
Cpgi312 1 63113125 to 63114806 1681 CpG island CpG island 312
Tssr11880 1 63114282 to 63114345 63 - TSS region transcription start site region 11880
Tssr7050 1 63114399 to 63114411 12 + TSS region transcription start site region 7050
Tssr7051 1 63114415 to 63114473 58 + TSS region transcription start site region 7051
Ino80dos 1 63114471 to 63158295 43824 + lincRNA gene INO80 complex subunit D, opposite strand
Tssr11881 1 63114516 to 63114539 23 - TSS region transcription start site region 11881
Tssr7052 1 63114733 to 63114765 32 + TSS region transcription start site region 7052
Tssr7053 1 63115050 to 63115055 5 + TSS region transcription start site region 7053
Gm20342 1 63117118 to 63126837 9719 + lincRNA gene predicted gene, 20342
Ndufs1 1 63143592 to 63176822 33230 - protein coding gene NADH:ubiquinone oxidoreductase core subunit S1
Gm24557 1 63161855 to 63161943 88 + miRNA gene predicted gene, 24557
Cpgi313 1 63176462 to 63177546 1084 CpG island CpG island 313
Tssr11882 1 63176653 to 63176707 54 - TSS region transcription start site region 11882
Tssr11883 1 63176805 to 63176817 12 - TSS region transcription start site region 11883
Tssr7054 1 63176818 to 63176919 101 + TSS region transcription start site region 7054
Eef1b2 1 63176831 to 63180486 3655 + protein coding gene eukaryotic translation elongation factor 1 beta 2
Tssr7055 1 63177051 to 63177054 3 + TSS region transcription start site region 7055
Tssr7056 1 63177091 to 63177096 5 + TSS region transcription start site region 7056
Tssr7057 1 63177119 to 63177145 26 + TSS region transcription start site region 7057
Tssr7058 1 63177746 to 63177760 14 + TSS region transcription start site region 7058
Gm27390 1 63177983 to 63178158 175 + unclassified non-coding RNA gene predicted gene, 27390