Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Bswt | 1 | 5650145 | heritable phenotypic marker | belly spot with white toes | ||
Gm38513 | 1 | 6639 | - | lncRNA gene | predicted gene, 38513 | |
D1Mit378 | 1 | 122 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 378 | ||
D1Dcr40 | 1 | 99 | DNA segment | DNA Segment, Chr 1, Derry C. Roopenian 40 | ||
Gm44468 | 1 | 104 | + | miRNA gene | predicted gene, 44468 | |
Gm24942 | 1 | 113 | + | snoRNA gene | predicted gene, 24942 | |
Rps13-ps7 | 1 | 367 | + | pseudogene | ribosomal protein S13, pseudogene 7 | |
Ino80d | 1 | 66466 | - | protein coding gene | INO80 complex subunit D | |
Rps27-ps1 | 1 | 245 | + | pseudogene | ribosomal protein S27, pseudogene 1 | |
D1Dcr41 | 1 | 102 | DNA segment | DNA Segment, Chr 1, Derry C. Roopenian 41 | ||
Tssr11877 | 1 | 14 | - | TSS region | transcription start site region 11877 | |
Tssr11878 | 1 | 4 | - | TSS region | transcription start site region 11878 | |
Tssr7048 | 1 | 1 | + | TSS region | transcription start site region 7048 | |
Tssr11879 | 1 | 4 | - | TSS region | transcription start site region 11879 | |
Tssr7049 | 1 | 16 | + | TSS region | transcription start site region 7049 | |
Cpgi312 | 1 | 1681 | CpG island | CpG island 312 | ||
Tssr11880 | 1 | 63 | - | TSS region | transcription start site region 11880 | |
Tssr7050 | 1 | 12 | + | TSS region | transcription start site region 7050 | |
Tssr7051 | 1 | 58 | + | TSS region | transcription start site region 7051 | |
Ino80dos | 1 | 43824 | + | lincRNA gene | INO80 complex subunit D, opposite strand | |
Tssr11881 | 1 | 23 | - | TSS region | transcription start site region 11881 | |
Tssr7052 | 1 | 32 | + | TSS region | transcription start site region 7052 | |
Tssr7053 | 1 | 5 | + | TSS region | transcription start site region 7053 | |
Gm20342 | 1 | 9719 | + | lincRNA gene | predicted gene, 20342 | |
Ndufs1 | 1 | 33230 | - | protein coding gene | NADH:ubiquinone oxidoreductase core subunit S1 | |
Gm24557 | 1 | 88 | + | miRNA gene | predicted gene, 24557 | |
Cpgi313 | 1 | 1084 | CpG island | CpG island 313 | ||
Tssr11882 | 1 | 54 | - | TSS region | transcription start site region 11882 | |
Tssr11883 | 1 | 12 | - | TSS region | transcription start site region 11883 | |
Tssr7054 | 1 | 101 | + | TSS region | transcription start site region 7054 | |
Eef1b2 | 1 | 3655 | + | protein coding gene | eukaryotic translation elongation factor 1 beta 2 | |
Tssr7055 | 1 | 3 | + | TSS region | transcription start site region 7055 | |
Tssr7056 | 1 | 5 | + | TSS region | transcription start site region 7056 | |
Tssr7057 | 1 | 26 | + | TSS region | transcription start site region 7057 | |
Tssr7058 | 1 | 14 | + | TSS region | transcription start site region 7058 | |
Gm27390 | 1 | 175 | + | unclassified non-coding RNA gene | predicted gene, 27390 | |
Tssr7059 | 1 | 20 | + | TSS region | transcription start site region 7059 | |
Gm26457 | 1 | 34 | + | snoRNA gene | predicted gene, 26457 | |
Tssr11884 | 1 | 38 | - | TSS region | transcription start site region 11884 | |
Snora41 | 1 | 112 | + | snoRNA gene | small nucleolar RNA, H/ACA box 41 | |
Gpr1 | 1 | 31852 | - | protein coding gene | G protein-coupled receptor 1 | |
Gm27512 | 1 | 125 | + | miRNA gene | predicted gene, 27512 | |
Cpgi314 | 1 | 443 | CpG island | CpG island 314 | ||
Platr12 | 1 | 7654 | + | unclassified non-coding RNA gene | pluripotency associated transcript 12 | |
Tssr7060 | 1 | 11 | + | TSS region | transcription start site region 7060 | |
Tssr7061 | 1 | 11 | + | TSS region | transcription start site region 7061 | |
Tssr7062 | 1 | 48 | + | TSS region | transcription start site region 7062 | |
Tssr11885 | 1 | 18 | - | TSS region | transcription start site region 11885 | |
Tssr11886 | 1 | 17 | - | TSS region | transcription start site region 11886 | |
Tssr11887 | 1 | 11 | - | TSS region | transcription start site region 11887 | |
Tssr11888 | 1 | 13 | - | TSS region | transcription start site region 11888 | |
1700039I01Rik | 1 | 478 | - | lncRNA gene | RIKEN cDNA 1700039I01 gene | |
Cpgi315 | 1 | 691 | CpG island | CpG island 315 | ||
Gm11608 | 1 | 6272 | - | lincRNA gene | predicted gene 11608 | |
Cpgi316 | 1 | 1244 | CpG island | CpG island 316 | ||
Tssr11889 | 1 | 15 | - | TSS region | transcription start site region 11889 | |
Tssr11890 | 1 | 24 | - | TSS region | transcription start site region 11890 | |
Tssr7063 | 1 | 27 | + | TSS region | transcription start site region 7063 | |
Gm24513 | 1 | 137 | - | miRNA gene | predicted gene, 24513 | |
Tssr7064 | 1 | 14 | + | TSS region | transcription start site region 7064 | |
Zdbf2 | 1 | 41311 | + | protein coding gene | zinc finger, DBF-type containing 2 | |
Tssr7065 | 1 | 5 | + | TSS region | transcription start site region 7065 | |
Gm23448 | 1 | 103 | - | snRNA gene | predicted gene, 23448 | |
Cpgi317 | 1 | 901 | CpG island | CpG island 317 | ||
Tssr7066 | 1 | 18 | + | TSS region | transcription start site region 7066 | |
D1Mit177 | 1 | 137 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 177 | ||
Gm11606 | 1 | 616 | - | pseudogene | predicted gene 11606 | |
Gm11605 | 1 | 645 | - | pseudogene | predicted gene 11605 | |
Gm35393 | 1 | 5152 | - | lncRNA gene | predicted gene, 35393 | |
Tssr11891 | 1 | 14 | - | TSS region | transcription start site region 11891 | |
Tssr7067 | 1 | 5 | + | TSS region | transcription start site region 7067 | |
Cpgi318 | 1 | 1582 | CpG island | CpG island 318 | ||
Tssr7068 | 1 | 50 | + | TSS region | transcription start site region 7068 | |
Tssr7069 | 1 | 101 | + | TSS region | transcription start site region 7069 | |
Adam23 | 1 | 150222 | + | protein coding gene | a disintegrin and metallopeptidase domain 23 | |
Tssr7070 | 1 | 32 | + | TSS region | transcription start site region 7070 | |
Tssr7071 | 1 | 14 | + | TSS region | transcription start site region 7071 | |
Tssr7072 | 1 | 5 | + | TSS region | transcription start site region 7072 | |
Tssr7073 | 1 | 10 | + | TSS region | transcription start site region 7073 | |
Tssr7074 | 1 | 9 | + | TSS region | transcription start site region 7074 | |
Gm22281 | 1 | 102 | - | snRNA gene | predicted gene, 22281 | |
Tssr7075 | 1 | 5 | + | TSS region | transcription start site region 7075 | |
Cpgi319 | 1 | 381 | CpG island | CpG island 319 | ||
Gm39653 | 1 | 4851 | + | protein coding gene | predicted gene, 39653 | |
Dytn | 1 | 64076 | - | protein coding gene | dystrotelin | |
Cpgi320 | 1 | 180 | CpG island | CpG island 320 | ||
Gm12748 | 1 | 503 | + | pseudogene | predicted gene 12748 | |
Tssr11892 | 1 | 13 | - | TSS region | transcription start site region 11892 | |
D1Mit466 | 1 | 144 | DNA segment | DNA Segment, Chr 1, Massachusetts Institute of Technology-466 | ||
Mdh1b | 1 | 31491 | - | protein coding gene | malate dehydrogenase 1B, NAD (soluble) | |
Tssr11893 | 1 | 36 | - | TSS region | transcription start site region 11893 | |
Cpgi321 | 1 | 549 | CpG island | CpG island 321 | ||
Tssr11894 | 1 | 8 | - | TSS region | transcription start site region 11894 | |
Fastkd2 | 1 | 22786 | + | protein coding gene | FAST kinase domains 2 | |
Tssr7076 | 1 | 41 | + | TSS region | transcription start site region 7076 | |
4933402D24Rik | 1 | 14358 | - | protein coding gene | RIKEN cDNA 4933402D24 gene | |
D1Mit5.1 | 1 | 149 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 5.1 | ||
Sle7 | 1 | 149 | QTL | systematic lupus erythematosus susceptibility 7 | ||
Yaa2 | 1 | 149 | QTL | Y-linked autoimmune acceleration QTL 2 | ||
Gm13751 | 1 | 751 | - | pseudogene | predicted gene 13751 | |
D1Mit300 | 1 | 116 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 300 | ||
D1Mit480 | 1 | 167 | DNA segment | DNA Segment, Chr 1 Massachusetts Institute of Technology 480 | ||
Gm13754 | 1 | 18084 | + | pseudogene | predicted gene 13754 | |
Gm13749 | 1 | 4272 | + | lincRNA gene | predicted gene 13749 | |
Klf7 | 1 | 92835 | - | protein coding gene | Kruppel-like factor 7 (ubiquitous) | |
Gm26649 | 1 | 3464 | + | lincRNA gene | predicted gene, 26649 | |
Tssr11895 | 1 | 11 | - | TSS region | transcription start site region 11895 | |
Tssr11896 | 1 | 15 | - | TSS region | transcription start site region 11896 | |
Tssr11897 | 1 | 10 | - | TSS region | transcription start site region 11897 | |
Tssr11898 | 1 | 13 | - | TSS region | transcription start site region 11898 | |
Tssr11899 | 1 | 20 | - | TSS region | transcription start site region 11899 | |
Tssr11900 | 1 | 20 | - | TSS region | transcription start site region 11900 | |
Tssr11901 | 1 | 16 | - | TSS region | transcription start site region 11901 | |
Tssr11902 | 1 | 25 | - | TSS region | transcription start site region 11902 | |
Tssr11903 | 1 | 21 | - | TSS region | transcription start site region 11903 | |
Mir6899 | 1 | 63 | - | miRNA gene | microRNA 6899 | |
Tssr7077 | 1 | 5 | + | TSS region | transcription start site region 7077 | |
Gm13748 | 1 | 12128 | + | antisense lncRNA gene | predicted gene 13748 | |
Cpgi322 | 1 | 311 | CpG island | CpG island 322 | ||
Tssr11904 | 1 | 16 | - | TSS region | transcription start site region 11904 | |
Tssr7078 | 1 | 7 | + | TSS region | transcription start site region 7078 | |
D1Dcr54 | 1 | 95 | DNA segment | DNA Segment, Chr 1, Derry C. Roopenian 54 | ||
Tssr11905 | 1 | 5 | - | TSS region | transcription start site region 11905 | |
D530037H12Rik | 1 | 4052 | unclassified gene | RIKEN cDNA D530037H12 gene | ||
Tssr11906 | 1 | 68 | - | TSS region | transcription start site region 11906 | |
Tssr11907 | 1 | 12 | - | TSS region | transcription start site region 11907 | |
Tssr11908 | 1 | 15 | - | TSS region | transcription start site region 11908 | |
Cpgi323 | 1 | 1297 | CpG island | CpG island 323 | ||
Tssr11909 | 1 | 35 | - | TSS region | transcription start site region 11909 | |
Tssr11910 | 1 | 9 | - | TSS region | transcription start site region 11910 | |
Tssr11911 | 1 | 11 | - | TSS region | transcription start site region 11911 | |
Tssr11912 | 1 | 54 | - | TSS region | transcription start site region 11912 | |
Tssr11913 | 1 | 7 | - | TSS region | transcription start site region 11913 | |
Gm35880 | 1 | 120663 | + | lncRNA gene | predicted gene, 35880 | |
Tssr11914 | 1 | 22 | - | TSS region | transcription start site region 11914 | |
Tssr7079 | 1 | 16 | + | TSS region | transcription start site region 7079 | |
Tssr7080 | 1 | 18 | + | TSS region | transcription start site region 7080 | |
Tssr11915 | 1 | 65 | - | TSS region | transcription start site region 11915 | |
Tssr7081 | 1 | 1 | + | TSS region | transcription start site region 7081 | |
Gm13750 | 1 | 464 | + | pseudogene | predicted gene 13750 | |
Gm28981 | 1 | 117052 | - | lincRNA gene | predicted gene 28981 | |
Tssr7082 | 1 | 3 | + | TSS region | transcription start site region 7082 | |
Gm39654 | 1 | 9162 | - | lncRNA gene | predicted gene, 39654 | |
Gm35803 | 1 | 19186 | + | lncRNA gene | predicted gene, 35803 | |
Tssr7083 | 1 | 26 | + | TSS region | transcription start site region 7083 | |
Tssr7084 | 1 | 17 | + | TSS region | transcription start site region 7084 | |
Tssr7085 | 1 | 32 | + | TSS region | transcription start site region 7085 | |
Tssr11916 | 1 | 11 | - | TSS region | transcription start site region 11916 | |
Tssr11917 | 1 | 10 | - | TSS region | transcription start site region 11917 | |
Tssr11918 | 1 | 15 | - | TSS region | transcription start site region 11918 | |
Tssr7086 | 1 | 32 | + | TSS region | transcription start site region 7086 | |
Tssr11919 | 1 | 23 | - | TSS region | transcription start site region 11919 | |
Cpgi324 | 1 | 431 | CpG island | CpG island 324 | ||
D1Mit125 | 1 | 119 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 125 | ||
Gct7 | 1 | 119 | QTL | granulosa cell tumorigenesis 7 | ||
Gm25748 | 1 | 69 | + | miRNA gene | predicted gene, 25748 | |
Gm28980 | 1 | 218 | - | pseudogene | predicted gene 28980 | |
Gm36148 | 1 | 4557 | + | lncRNA gene | predicted gene, 36148 | |
Tssr11920 | 1 | 5 | - | TSS region | transcription start site region 11920 | |
Tssr11921 | 1 | 5 | - | TSS region | transcription start site region 11921 | |
Cpgi325 | 1 | 1868 | CpG island | CpG island 325 | ||
Tssr7087 | 1 | 18 | + | TSS region | transcription start site region 7087 | |
Tssr11922 | 1 | 8 | - | TSS region | transcription start site region 11922 | |
Tssr11923 | 1 | 19 | - | TSS region | transcription start site region 11923 | |
Tssr7088 | 1 | 23 | + | TSS region | transcription start site region 7088 | |
Tssr7089 | 1 | 10 | + | TSS region | transcription start site region 7089 | |
Creb1 | 1 | 71903 | + | protein coding gene | cAMP responsive element binding protein 1 | |
Tssr98 | 1 | 49 | - | TSS region | transcription start site region 98 | |
Tssr7090 | 1 | 25 | + | TSS region | transcription start site region 7090 | |
Tssr7091 | 1 | 39 | + | TSS region | transcription start site region 7091 | |
Tssr11924 | 1 | 41 | - | TSS region | transcription start site region 11924 | |
Tssr7092 | 1 | 11 | + | TSS region | transcription start site region 7092 | |
Tssr7093 | 1 | 9 | + | TSS region | transcription start site region 7093 | |
Tssr7094 | 1 | 15 | + | TSS region | transcription start site region 7094 | |
Tssr7095 | 1 | 19 | + | TSS region | transcription start site region 7095 | |
Mettl21a | 1 | 10769 | - | protein coding gene | methyltransferase like 21A | |
Cpgi326 | 1 | 1040 | CpG island | CpG island 326 | ||
Tssr11925 | 1 | 85 | - | TSS region | transcription start site region 11925 | |
Gm28982 | 1 | 8249 | + | lincRNA gene | predicted gene 28982 | |
BC019684 | 1 | 2248 | unclassified gene | cDNA sequence BC019684 | ||
Gm29152 | 1 | 2821 | + | lincRNA gene | predicted gene 29152 | |
2810408I11Rik | 1 | 10788 | - | lncRNA gene | RIKEN cDNA 2810408I11 gene | |
Cpgi327 | 1 | 1486 | CpG island | CpG island 327 | ||
Tssr7096 | 1 | 5 | + | TSS region | transcription start site region 7096 | |
Tssr7097 | 1 | 24 | + | TSS region | transcription start site region 7097 | |
Tssr11926 | 1 | 9 | - | TSS region | transcription start site region 11926 | |
Tssr11927 | 1 | 20 | - | TSS region | transcription start site region 11927 | |
Tssr11928 | 1 | 16 | - | TSS region | transcription start site region 11928 | |
Tssr7098 | 1 | 12 | + | TSS region | transcription start site region 7098 | |
Tssr7099 | 1 | 5 | + | TSS region | transcription start site region 7099 | |
Tssr7100 | 1 | 20 | + | TSS region | transcription start site region 7100 | |
Tssr11929 | 1 | 32 | - | TSS region | transcription start site region 11929 | |
Ccnyl1 | 1 | 34605 | + | protein coding gene | cyclin Y-like 1 | |
Fzd5 | 1 | 7192 | - | protein coding gene | frizzled class receptor 5 | |
Ssial1 | 1 | -89800973 | QTL | susceptibility to sialadenitis 1 | ||
Hcs9 | 1 | -125755889 | QTL | hepatocarcinogenesis susceptibility 9 |