Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:62854790-63101429

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Col4a1m1 1 25511110 to 62907723 37396613 QTL collagen, type IV, alpha 1 modifier 1
Shm3 1 44147744 to 62907723 18759979 QTL sperm head morphology 3
Idd5.1 1 57689117 to 62907723 5218606 QTL insulin dependent diabetes susceptibility 5.1
Gm35252 1 62906176 to 62956594 50418 - lncRNA gene predicted gene, 35252
D1Mit303 1 62907596 to 62907723 127 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 303
Ssta1 1 62907596 to 62907723 127 QTL susceptibility to Salmonella typhimurium antigens 1
Tssr96 1 62931168 to 62931171 3 + TSS region transcription start site region 96
Tssr97 1 62938387 to 62938393 6 + TSS region transcription start site region 97
Gm38513 1 62974790 to 62981429 6639 - lncRNA gene predicted gene, 38513
D1Mit378 1 63023833 to 63023955 122 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 378
D1Dcr40 1 63023866 to 63023965 99 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 40
Gm44468 1 63025742 to 63025846 104 + miRNA gene predicted gene, 44468
Gm24942 1 63032706 to 63032819 113 + snoRNA gene predicted gene, 24942
Rps13-ps7 1 63038214 to 63038581 367 + pseudogene ribosomal protein S13, pseudogene 7
Ino80d 1 63047801 to 63114267 66466 - protein coding gene INO80 complex subunit D
Rps27-ps1 1 63073774 to 63074019 245 + pseudogene ribosomal protein S27, pseudogene 1
D1Dcr41 1 63087223 to 63087325 102 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 41
Tssr11877 1 63088481 to 63088495 14 - TSS region transcription start site region 11877
Tssr11878 1 63095996 to 63096000 4 - TSS region transcription start site region 11878
Abbp1 1 120601949 to 62907596 -57694353 QTL A/J and C57BL/6 blood pressure 1