Gene symbol |
Chromo- some |
Coordinates (bp, mm10) |
Size (bp) |
Strand |
Feature Type |
Gene name |
---|---|---|---|---|---|---|
Col4a1m1 | 1 | 37396613 | QTL | collagen, type IV, alpha 1 modifier 1 | ||
Shm3 | 1 | 18759979 | QTL | sperm head morphology 3 | ||
Idd5.1 | 1 | 5218606 | QTL | insulin dependent diabetes susceptibility 5.1 | ||
Bswt | 1 | 5650145 | heritable phenotypic marker | belly spot with white toes | ||
Pard3b | 1 | 1003460 | + | protein coding gene | par-3 family cell polarity regulator beta | |
Gm29641 | 1 | 258 | - | pseudogene | predicted gene 29641 | |
Pard3bos2 | 1 | 4914 | - | antisense lncRNA gene | par-3 family cell polarity regulator beta, opposite strand 2 | |
Gm38351 | 1 | 2517 | + | unclassified gene | predicted gene, 38351 | |
Pard3bos3 | 1 | 42536 | - | antisense lncRNA gene | par-3 family cell polarity regulator beta, opposite strand 3 | |
Tssr6979 | 1 | 16 | + | TSS region | transcription start site region 6979 | |
Gm34881 | 1 | 12741 | - | lncRNA gene | predicted gene, 34881 | |
Tssr6980 | 1 | 5 | + | TSS region | transcription start site region 6980 | |
Gm29084 | 1 | 1451 | - | antisense lncRNA gene | predicted gene 29084 | |
Gm11600 | 1 | 1093 | - | pseudogene | predicted gene 11600 | |
Tssr6981 | 1 | 1 | + | TSS region | transcription start site region 6981 | |
Gm11599 | 1 | 877 | + | pseudogene | predicted gene 11599 | |
Cpgi309 | 1 | 1155 | CpG island | CpG island 309 | ||
Tssr11871 | 1 | 5 | - | TSS region | transcription start site region 11871 | |
Tssr6982 | 1 | 10 | + | TSS region | transcription start site region 6982 | |
Nrp2 | 1 | 115375 | + | protein coding gene | neuropilin 2 | |
Tssr6983 | 1 | 19 | + | TSS region | transcription start site region 6983 | |
Tssr6984 | 1 | 17 | + | TSS region | transcription start site region 6984 | |
Tssr6985 | 1 | 11 | + | TSS region | transcription start site region 6985 | |
Tssr6986 | 1 | 15 | + | TSS region | transcription start site region 6986 | |
Tssr6987 | 1 | 35 | + | TSS region | transcription start site region 6987 | |
Tssr11872 | 1 | 51 | - | TSS region | transcription start site region 11872 | |
Tssr6988 | 1 | 18 | + | TSS region | transcription start site region 6988 | |
Tssr6989 | 1 | 36 | + | TSS region | transcription start site region 6989 | |
Tssr6990 | 1 | 11 | + | TSS region | transcription start site region 6990 | |
D1Mit379 | 1 | 86 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 379 | ||
Cpgi310 | 1 | 2383 | CpG island | CpG island 310 | ||
Tssr6991 | 1 | 24 | + | TSS region | transcription start site region 6991 | |
Tssr6992 | 1 | 29 | + | TSS region | transcription start site region 6992 | |
Tssr6993 | 1 | 13 | + | TSS region | transcription start site region 6993 | |
Tssr6994 | 1 | 7 | + | TSS region | transcription start site region 6994 | |
Gm29083 | 1 | 3350 | - | antisense lncRNA gene | predicted gene 29083 | |
Tssr6995 | 1 | 11 | + | TSS region | transcription start site region 6995 | |
Tssr6996 | 1 | 25 | + | TSS region | transcription start site region 6996 | |
Tssr6997 | 1 | 29 | + | TSS region | transcription start site region 6997 | |
Tssr6998 | 1 | 14 | + | TSS region | transcription start site region 6998 | |
Tssr6999 | 1 | 19 | + | TSS region | transcription start site region 6999 | |
Tssr7000 | 1 | 11 | + | TSS region | transcription start site region 7000 | |
Tssr7001 | 1 | 11 | + | TSS region | transcription start site region 7001 | |
Tssr7002 | 1 | 16 | + | TSS region | transcription start site region 7002 | |
Tssr7003 | 1 | 32 | + | TSS region | transcription start site region 7003 | |
Tssr7004 | 1 | 59 | + | TSS region | transcription start site region 7004 | |
Tssr7005 | 1 | 58 | + | TSS region | transcription start site region 7005 | |
Tssr7006 | 1 | 90 | + | TSS region | transcription start site region 7006 | |
Tssr7007 | 1 | 18 | + | TSS region | transcription start site region 7007 | |
Tssr7008 | 1 | 29 | + | TSS region | transcription start site region 7008 | |
Tssr7009 | 1 | 50 | + | TSS region | transcription start site region 7009 | |
Tssr7010 | 1 | 21 | + | TSS region | transcription start site region 7010 | |
Tssr7011 | 1 | 12 | + | TSS region | transcription start site region 7011 | |
Tssr11873 | 1 | 2 | - | TSS region | transcription start site region 11873 | |
Tssr7012 | 1 | 15 | + | TSS region | transcription start site region 7012 | |
Tssr7013 | 1 | 15 | + | TSS region | transcription start site region 7013 | |
Tssr7014 | 1 | 22 | + | TSS region | transcription start site region 7014 | |
Tssr11874 | 1 | 20 | - | TSS region | transcription start site region 11874 | |
Tssr7015 | 1 | 30 | + | TSS region | transcription start site region 7015 | |
Tssr7016 | 1 | 15 | + | TSS region | transcription start site region 7016 | |
Tssr7017 | 1 | 16 | + | TSS region | transcription start site region 7017 | |
Tssr7018 | 1 | 28 | + | TSS region | transcription start site region 7018 | |
Tssr7019 | 1 | 6 | + | TSS region | transcription start site region 7019 | |
Tssr7020 | 1 | 17 | + | TSS region | transcription start site region 7020 | |
Tssr7021 | 1 | 16 | + | TSS region | transcription start site region 7021 | |
Tssr7022 | 1 | 13 | + | TSS region | transcription start site region 7022 | |
Tssr7023 | 1 | 4 | + | TSS region | transcription start site region 7023 | |
Tssr7024 | 1 | 35 | + | TSS region | transcription start site region 7024 | |
Tssr7025 | 1 | 15 | + | TSS region | transcription start site region 7025 | |
Tssr7026 | 1 | 10 | + | TSS region | transcription start site region 7026 | |
Tssr7027 | 1 | 38 | + | TSS region | transcription start site region 7027 | |
4930487H11Rik | 1 | 3814 | - | lncRNA gene | RIKEN cDNA 4930487H11 gene | |
Tssr7028 | 1 | 45 | + | TSS region | transcription start site region 7028 | |
Tssr7029 | 1 | 31 | + | TSS region | transcription start site region 7029 | |
Cpgi311 | 1 | 352 | CpG island | CpG island 311 | ||
Tssr7030 | 1 | 15 | + | TSS region | transcription start site region 7030 | |
Tssr7031 | 1 | 14 | + | TSS region | transcription start site region 7031 | |
Tssr7032 | 1 | 46 | + | TSS region | transcription start site region 7032 | |
Tssr7033 | 1 | 89 | + | TSS region | transcription start site region 7033 | |
Tssr7034 | 1 | 11 | + | TSS region | transcription start site region 7034 | |
Tssr7035 | 1 | 5 | + | TSS region | transcription start site region 7035 | |
Tssr7036 | 1 | 19 | + | TSS region | transcription start site region 7036 | |
Tssr7037 | 1 | 54 | + | TSS region | transcription start site region 7037 | |
Tssr7038 | 1 | 14 | + | TSS region | transcription start site region 7038 | |
Tssr7039 | 1 | 22 | + | TSS region | transcription start site region 7039 | |
Tssr7040 | 1 | 12 | + | TSS region | transcription start site region 7040 | |
Tssr11875 | 1 | 25 | - | TSS region | transcription start site region 11875 | |
Gm37121 | 1 | 2555 | + | unclassified gene | predicted gene, 37121 | |
Tssr7041 | 1 | 16 | + | TSS region | transcription start site region 7041 | |
Tssr7042 | 1 | 19 | + | TSS region | transcription start site region 7042 | |
Tssr7043 | 1 | 31 | + | TSS region | transcription start site region 7043 | |
Tssr7044 | 1 | 21 | + | TSS region | transcription start site region 7044 | |
Tssr7045 | 1 | 12 | + | TSS region | transcription start site region 7045 | |
Tssr7046 | 1 | 13 | + | TSS region | transcription start site region 7046 | |
Tssr7047 | 1 | 22 | + | TSS region | transcription start site region 7047 | |
Gm4208 | 1 | 11015 | - | lincRNA gene | predicted gene 4208 | |
Tssr11876 | 1 | 8 | - | TSS region | transcription start site region 11876 | |
Gm35120 | 1 | 2952 | + | lncRNA gene | predicted gene, 35120 | |
Gm39652 | 1 | 4054 | - | lncRNA gene | predicted gene, 39652 | |
Gm35252 | 1 | 50418 | - | lncRNA gene | predicted gene, 35252 | |
D1Mit303 | 1 | 127 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 303 | ||
Ssta1 | 1 | 127 | QTL | susceptibility to Salmonella typhimurium antigens 1 | ||
Tssr96 | 1 | 3 | + | TSS region | transcription start site region 96 | |
Tssr97 | 1 | 6 | + | TSS region | transcription start site region 97 | |
Gm38513 | 1 | 6639 | - | lncRNA gene | predicted gene, 38513 | |
D1Mit378 | 1 | 122 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 378 | ||
D1Dcr40 | 1 | 99 | DNA segment | DNA Segment, Chr 1, Derry C. Roopenian 40 | ||
Gm44468 | 1 | 104 | + | miRNA gene | predicted gene, 44468 | |
Gm24942 | 1 | 113 | + | snoRNA gene | predicted gene, 24942 | |
Rps13-ps7 | 1 | 367 | + | pseudogene | ribosomal protein S13, pseudogene 7 | |
Ino80d | 1 | 66466 | - | protein coding gene | INO80 complex subunit D | |
Rps27-ps1 | 1 | 245 | + | pseudogene | ribosomal protein S27, pseudogene 1 | |
D1Dcr41 | 1 | 102 | DNA segment | DNA Segment, Chr 1, Derry C. Roopenian 41 | ||
Tssr11877 | 1 | 14 | - | TSS region | transcription start site region 11877 | |
Tssr11878 | 1 | 4 | - | TSS region | transcription start site region 11878 | |
Tssr7048 | 1 | 1 | + | TSS region | transcription start site region 7048 | |
Tssr11879 | 1 | 4 | - | TSS region | transcription start site region 11879 | |
Tssr7049 | 1 | 16 | + | TSS region | transcription start site region 7049 | |
Cpgi312 | 1 | 1681 | CpG island | CpG island 312 | ||
Tssr11880 | 1 | 63 | - | TSS region | transcription start site region 11880 | |
Tssr7050 | 1 | 12 | + | TSS region | transcription start site region 7050 | |
Tssr7051 | 1 | 58 | + | TSS region | transcription start site region 7051 | |
Ino80dos | 1 | 43824 | + | lincRNA gene | INO80 complex subunit D, opposite strand | |
Tssr11881 | 1 | 23 | - | TSS region | transcription start site region 11881 | |
Tssr7052 | 1 | 32 | + | TSS region | transcription start site region 7052 | |
Tssr7053 | 1 | 5 | + | TSS region | transcription start site region 7053 | |
Gm20342 | 1 | 9719 | + | lincRNA gene | predicted gene, 20342 | |
Ndufs1 | 1 | 33230 | - | protein coding gene | NADH:ubiquinone oxidoreductase core subunit S1 | |
Gm24557 | 1 | 88 | + | miRNA gene | predicted gene, 24557 | |
Cpgi313 | 1 | 1084 | CpG island | CpG island 313 | ||
Tssr11882 | 1 | 54 | - | TSS region | transcription start site region 11882 | |
Tssr11883 | 1 | 12 | - | TSS region | transcription start site region 11883 | |
Tssr7054 | 1 | 101 | + | TSS region | transcription start site region 7054 | |
Eef1b2 | 1 | 3655 | + | protein coding gene | eukaryotic translation elongation factor 1 beta 2 | |
Tssr7055 | 1 | 3 | + | TSS region | transcription start site region 7055 | |
Tssr7056 | 1 | 5 | + | TSS region | transcription start site region 7056 | |
Tssr7057 | 1 | 26 | + | TSS region | transcription start site region 7057 | |
Tssr7058 | 1 | 14 | + | TSS region | transcription start site region 7058 | |
Gm27390 | 1 | 175 | + | unclassified non-coding RNA gene | predicted gene, 27390 | |
Tssr7059 | 1 | 20 | + | TSS region | transcription start site region 7059 | |
Gm26457 | 1 | 34 | + | snoRNA gene | predicted gene, 26457 | |
Tssr11884 | 1 | 38 | - | TSS region | transcription start site region 11884 | |
Snora41 | 1 | 112 | + | snoRNA gene | small nucleolar RNA, H/ACA box 41 | |
Gpr1 | 1 | 31852 | - | protein coding gene | G protein-coupled receptor 1 | |
Gm27512 | 1 | 125 | + | miRNA gene | predicted gene, 27512 | |
Cpgi314 | 1 | 443 | CpG island | CpG island 314 | ||
Platr12 | 1 | 7654 | + | unclassified non-coding RNA gene | pluripotency associated transcript 12 | |
Tssr7060 | 1 | 11 | + | TSS region | transcription start site region 7060 | |
Tssr7061 | 1 | 11 | + | TSS region | transcription start site region 7061 | |
Tssr7062 | 1 | 48 | + | TSS region | transcription start site region 7062 | |
Tssr11885 | 1 | 18 | - | TSS region | transcription start site region 11885 | |
Tssr11886 | 1 | 17 | - | TSS region | transcription start site region 11886 | |
Tssr11887 | 1 | 11 | - | TSS region | transcription start site region 11887 | |
Tssr11888 | 1 | 13 | - | TSS region | transcription start site region 11888 | |
1700039I01Rik | 1 | 478 | - | lncRNA gene | RIKEN cDNA 1700039I01 gene | |
Cpgi315 | 1 | 691 | CpG island | CpG island 315 | ||
Gm11608 | 1 | 6272 | - | lincRNA gene | predicted gene 11608 | |
Cpgi316 | 1 | 1244 | CpG island | CpG island 316 | ||
Tssr11889 | 1 | 15 | - | TSS region | transcription start site region 11889 | |
Tssr11890 | 1 | 24 | - | TSS region | transcription start site region 11890 | |
Tssr7063 | 1 | 27 | + | TSS region | transcription start site region 7063 | |
Gm24513 | 1 | 137 | - | miRNA gene | predicted gene, 24513 | |
Tssr7064 | 1 | 14 | + | TSS region | transcription start site region 7064 | |
Zdbf2 | 1 | 41311 | + | protein coding gene | zinc finger, DBF-type containing 2 | |
Tssr7065 | 1 | 5 | + | TSS region | transcription start site region 7065 | |
Gm23448 | 1 | 103 | - | snRNA gene | predicted gene, 23448 | |
Cpgi317 | 1 | 901 | CpG island | CpG island 317 | ||
Tssr7066 | 1 | 18 | + | TSS region | transcription start site region 7066 | |
D1Mit177 | 1 | 137 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 177 | ||
Gm11606 | 1 | 616 | - | pseudogene | predicted gene 11606 | |
Gm11605 | 1 | 645 | - | pseudogene | predicted gene 11605 | |
Gm35393 | 1 | 5152 | - | lncRNA gene | predicted gene, 35393 | |
Tssr11891 | 1 | 14 | - | TSS region | transcription start site region 11891 | |
Tssr7067 | 1 | 5 | + | TSS region | transcription start site region 7067 | |
Cpgi318 | 1 | 1582 | CpG island | CpG island 318 | ||
Tssr7068 | 1 | 50 | + | TSS region | transcription start site region 7068 | |
Tssr7069 | 1 | 101 | + | TSS region | transcription start site region 7069 | |
Adam23 | 1 | 150222 | + | protein coding gene | a disintegrin and metallopeptidase domain 23 | |
Tssr7070 | 1 | 32 | + | TSS region | transcription start site region 7070 | |
Tssr7071 | 1 | 14 | + | TSS region | transcription start site region 7071 | |
Tssr7072 | 1 | 5 | + | TSS region | transcription start site region 7072 | |
Tssr7073 | 1 | 10 | + | TSS region | transcription start site region 7073 | |
Tssr7074 | 1 | 9 | + | TSS region | transcription start site region 7074 | |
Gm22281 | 1 | 102 | - | snRNA gene | predicted gene, 22281 | |
Tssr7075 | 1 | 5 | + | TSS region | transcription start site region 7075 | |
Cpgi319 | 1 | 381 | CpG island | CpG island 319 | ||
Gm39653 | 1 | 4851 | + | protein coding gene | predicted gene, 39653 | |
Dytn | 1 | 64076 | - | protein coding gene | dystrotelin | |
Cpgi320 | 1 | 180 | CpG island | CpG island 320 | ||
Gm12748 | 1 | 503 | + | pseudogene | predicted gene 12748 | |
Tssr11892 | 1 | 13 | - | TSS region | transcription start site region 11892 | |
D1Mit466 | 1 | 144 | DNA segment | DNA Segment, Chr 1, Massachusetts Institute of Technology-466 | ||
Mdh1b | 1 | 31491 | - | protein coding gene | malate dehydrogenase 1B, NAD (soluble) | |
Tssr11893 | 1 | 36 | - | TSS region | transcription start site region 11893 | |
Cpgi321 | 1 | 549 | CpG island | CpG island 321 | ||
Tssr11894 | 1 | 8 | - | TSS region | transcription start site region 11894 | |
Fastkd2 | 1 | 22786 | + | protein coding gene | FAST kinase domains 2 | |
Tssr7076 | 1 | 41 | + | TSS region | transcription start site region 7076 | |
4933402D24Rik | 1 | 14358 | - | protein coding gene | RIKEN cDNA 4933402D24 gene | |
D1Mit5.1 | 1 | 149 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 5.1 |