Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:60911378-61334004

Filter by:
25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ctla4 1 60909025 to 60915832 6807 + protein coding gene cytotoxic T-lymphocyte-associated protein 4
Tssr6962 1 60911925 to 60911932 7 + TSS region transcription start site region 6962
Tssr11867 1 60913335 to 60913348 13 - TSS region transcription start site region 11867
Tssr6963 1 60913666 to 60913672 6 + TSS region transcription start site region 6963
Tssr6964 1 60913920 to 60913934 14 + TSS region transcription start site region 6964
Tssr6965 1 60914624 to 60914660 36 + TSS region transcription start site region 6965
Cpgi306 1 60921162 to 60921343 181 CpG island CpG island 306
Tssr6966 1 60921226 to 60921242 16 + TSS region transcription start site region 6966
Gm34649 1 60921232 to 60945017 23785 + lncRNA gene predicted gene, 34649
Gm11582 1 60948230 to 60948465 235 - pseudogene predicted gene 11582
Tssr11868 1 60974372 to 60974397 25 - TSS region transcription start site region 11868
Tssr6967 1 60977898 to 60977937 39 + TSS region transcription start site region 6967
Icos 1 60977927 to 61000320 22393 + protein coding gene inducible T cell co-stimulator
Tssr6968 1 60977940 to 60977957 17 + TSS region transcription start site region 6968
Gm37039 1 60989479 to 60991963 2484 + unclassified gene predicted gene, 37039
Tssr6969 1 60998187 to 60998192 5 + TSS region transcription start site region 6969
Tssr6970 1 61075637 to 61075639 2 + TSS region transcription start site region 6970
Rpl17-ps1 1 61075674 to 61076225 551 + pseudogene ribosomal protein L17, pseudogene 1
Gm11590 1 61121378 to 61124004 2626 - pseudogene predicted gene 11590
D1Mit301 1 61137376 to 61137475 99 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 301
Gm11591 1 61196541 to 61197242 701 - pseudogene predicted gene 11591
Cpgi307 1 61203217 to 61203381 164 CpG island CpG island 307
D1Mit176 1 61257330 to 61257440 110 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 176
Gm28083 1 61265291 to 61271514 6223 - lincRNA gene predicted gene 28083
Gm11587 1 61301909 to 61307746 5837 + lincRNA gene predicted gene 11587