Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:60502251-60682709

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Raph1 1 60482292 to 60567104 84812 - protein coding gene Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
Tssr11854 1 60504792 to 60504801 9 - TSS region transcription start site region 11854
Tssr11855 1 60517153 to 60517158 5 - TSS region transcription start site region 11855
C730045O03Rik 1 60520813 to 60522290 1477 unclassified gene RIKEN cDNA C730045O03 gene
Gm11575 1 60522839 to 60523066 227 - pseudogene predicted gene 11575
D1Mit479 1 60527184 to 60527286 102 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 479
Gm11576 1 60537020 to 60537436 416 + pseudogene predicted gene 11576
Cpgi304 1 60566001 to 60567526 1525 CpG island CpG island 304
Tssr11856 1 60566708 to 60566756 48 - TSS region transcription start site region 11856
Tssr11857 1 60566810 to 60566836 26 - TSS region transcription start site region 11857
Tssr11858 1 60567077 to 60567111 34 - TSS region transcription start site region 11858
Gm11578 1 60592251 to 60592709 458 - pseudogene predicted gene 11578
Gm38388 1 60594807 to 60596236 1429 - lncRNA gene predicted gene, 38388
Tssr6929 1 60596658 to 60596661 3 + TSS region transcription start site region 6929
Tssr6930 1 60609201 to 60609218 17 + TSS region transcription start site region 6930
Tssr6931 1 60609222 to 60609229 7 + TSS region transcription start site region 6931
Gm23762 1 60613698 to 60613803 105 - miRNA gene predicted gene, 23762