Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:60382292-60667104

28 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cyp20a1	1	60343323 to 60388060	44737	+	protein coding gene	cytochrome P450, family 20, subfamily a, polypeptide 1
Cpgi303	1	60408994 to 60410355	1361		CpG island	CpG island 303
Tssr6924	1	60409544 to 60409600	56	+	TSS region	transcription start site region 6924
Tssr6925	1	60409612 to 60409648	36	+	TSS region	transcription start site region 6925
Abi2	1	60409619 to 60481158	71539	+	protein coding gene	abl-interactor 2
Tssr6926	1	60409660 to 60409754	94	+	TSS region	transcription start site region 6926
Tssr6927	1	60409773 to 60409802	29	+	TSS region	transcription start site region 6927
Raph1	1	60482292 to 60567104	84812	-	protein coding gene	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
Tssr11851	1	60486618 to 60486652	34	-	TSS region	transcription start site region 11851
Tssr11852	1	60489818 to 60489835	17	-	TSS region	transcription start site region 11852
Tssr6928	1	60490201 to 60490220	19	+	TSS region	transcription start site region 6928
Tssr11853	1	60498508 to 60498529	21	-	TSS region	transcription start site region 11853
Tssr11854	1	60504792 to 60504801	9	-	TSS region	transcription start site region 11854
Tssr11855	1	60517153 to 60517158	5	-	TSS region	transcription start site region 11855
C730045O03Rik	1	60520813 to 60522290	1477		unclassified gene	RIKEN cDNA C730045O03 gene
Gm11575	1	60522839 to 60523066	227	-	pseudogene	predicted gene 11575
D1Mit479	1	60527184 to 60527286	102		DNA segment	DNA Segment, Chr 1 Massachusetts Institute of Technology 479
Gm11576	1	60537020 to 60537436	416	+	pseudogene	predicted gene 11576
Cpgi304	1	60566001 to 60567526	1525		CpG island	CpG island 304
Tssr11856	1	60566708 to 60566756	48	-	TSS region	transcription start site region 11856
Tssr11857	1	60566810 to 60566836	26	-	TSS region	transcription start site region 11857
Tssr11858	1	60567077 to 60567111	34	-	TSS region	transcription start site region 11858
Gm11578	1	60592251 to 60592709	458	-	pseudogene	predicted gene 11578
Gm38388	1	60594807 to 60596236	1429	-	lncRNA gene	predicted gene, 38388
Tssr6929	1	60596658 to 60596661	3	+	TSS region	transcription start site region 6929
Tssr6930	1	60609201 to 60609218	17	+	TSS region	transcription start site region 6930
Tssr6931	1	60609222 to 60609229	7	+	TSS region	transcription start site region 6931
Gm23762	1	60613698 to 60613803	105	-	miRNA gene	predicted gene, 23762