Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Col4a1m1 | 1 | 37396613 | QTL | collagen, type IV, alpha 1 modifier 1 | ||
Shm3 | 1 | 18759979 | QTL | sperm head morphology 3 | ||
Idd5.1 | 1 | 5218606 | QTL | insulin dependent diabetes susceptibility 5.1 | ||
Dbf | 1 | 23067481 | heritable phenotypic marker | doublefoot | ||
Vertcling | 1 | 136 | QTL | vertical clinging | ||
D1Mit22 | 1 | 136 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 22 | ||
Cpgi297 | 1 | 1729 | CpG island | CpG island 297 | ||
Tssr6911 | 1 | 55 | + | TSS region | transcription start site region 6911 | |
Fam117b | 1 | 72340 | + | protein coding gene | family with sequence similarity 117, member B | |
Tssr6912 | 1 | 11 | + | TSS region | transcription start site region 6912 | |
Tssr6913 | 1 | 16 | + | TSS region | transcription start site region 6913 | |
Tssr6914 | 1 | 53 | + | TSS region | transcription start site region 6914 | |
Gm37531 | 1 | 5414 | + | unclassified gene | predicted gene, 37531 | |
Gm18829 | 1 | 2058 | - | pseudogene | predicted gene, 18829 | |
Tssr6915 | 1 | 4 | + | TSS region | transcription start site region 6915 | |
Tssr6916 | 1 | 2 | + | TSS region | transcription start site region 6916 | |
Ica1l | 1 | 54444 | - | protein coding gene | islet cell autoantigen 1-like | |
Tssr11841 | 1 | 16 | - | TSS region | transcription start site region 11841 | |
Cpgi298 | 1 | 1177 | CpG island | CpG island 298 | ||
Tssr11842 | 1 | 44 | - | TSS region | transcription start site region 11842 | |
Tssr11843 | 1 | 83 | - | TSS region | transcription start site region 11843 | |
D1Wsu158e | 1 | 186 | DNA segment | DNA segment, Chr 1, Wayne State University 158, expressed | ||
Wdr12 | 1 | 21632 | - | protein coding gene | WD repeat domain 12 | |
Cpgi299 | 1 | 196 | CpG island | CpG island 299 | ||
Tssr11844 | 1 | 90 | - | TSS region | transcription start site region 11844 | |
Tssr11845 | 1 | 31 | - | TSS region | transcription start site region 11845 | |
Cpgi300 | 1 | 760 | CpG island | CpG island 300 | ||
Tssr11846 | 1 | 14 | - | TSS region | transcription start site region 11846 | |
Tssr11847 | 1 | 11 | - | TSS region | transcription start site region 11847 | |
Tssr11848 | 1 | 20 | - | TSS region | transcription start site region 11848 | |
Tssr11849 | 1 | 11 | - | TSS region | transcription start site region 11849 | |
Carf | 1 | 55706 | + | protein coding gene | calcium response factor | |
Tssr6917 | 1 | 36 | + | TSS region | transcription start site region 6917 | |
Tssr6918 | 1 | 11 | + | TSS region | transcription start site region 6918 | |
Gm15464 | 1 | 430 | + | pseudogene | predicted gene 15464 | |
Cpgi301 | 1 | 1051 | CpG island | CpG island 301 | ||
Tssr11850 | 1 | 11 | - | TSS region | transcription start site region 11850 | |
Tssr6919 | 1 | 53 | + | TSS region | transcription start site region 6919 | |
Nbeal1 | 1 | 157729 | + | protein coding gene | neurobeachin like 1 | |
Tssr6920 | 1 | 10 | + | TSS region | transcription start site region 6920 | |
Tssr6921 | 1 | 3 | + | TSS region | transcription start site region 6921 | |
Gm29332 | 1 | 226 | - | pseudogene | predicted gene 29332 | |
Cpgi302 | 1 | 900 | CpG island | CpG island 302 | ||
Tssr6922 | 1 | 65 | + | TSS region | transcription start site region 6922 | |
Cyp20a1 | 1 | 44737 | + | protein coding gene | cytochrome P450, family 20, subfamily a, polypeptide 1 | |
Tssr6923 | 1 | 19 | + | TSS region | transcription start site region 6923 | |
6030460B20Rik | 1 | 1057 | + | unclassified gene | RIKEN cDNA 6030460B20 gene | |
Cpgi303 | 1 | 1361 | CpG island | CpG island 303 | ||
Tssr6924 | 1 | 56 | + | TSS region | transcription start site region 6924 | |
Tssr6925 | 1 | 36 | + | TSS region | transcription start site region 6925 | |
Abi2 | 1 | 71539 | + | protein coding gene | abl-interactor 2 | |
Tssr6926 | 1 | 94 | + | TSS region | transcription start site region 6926 | |
Tssr6927 | 1 | 29 | + | TSS region | transcription start site region 6927 | |
Raph1 | 1 | 84812 | - | protein coding gene | Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 | |
Tssr11851 | 1 | 34 | - | TSS region | transcription start site region 11851 | |
Tssr11852 | 1 | 17 | - | TSS region | transcription start site region 11852 | |
Tssr6928 | 1 | 19 | + | TSS region | transcription start site region 6928 | |
Tssr11853 | 1 | 21 | - | TSS region | transcription start site region 11853 | |
Tssr11854 | 1 | 9 | - | TSS region | transcription start site region 11854 | |
Tssr11855 | 1 | 5 | - | TSS region | transcription start site region 11855 | |
C730045O03Rik | 1 | 1477 | unclassified gene | RIKEN cDNA C730045O03 gene | ||
Gm11575 | 1 | 227 | - | pseudogene | predicted gene 11575 | |
D1Mit479 | 1 | 102 | DNA segment | DNA Segment, Chr 1 Massachusetts Institute of Technology 479 | ||
Gm11576 | 1 | 416 | + | pseudogene | predicted gene 11576 | |
Cpgi304 | 1 | 1525 | CpG island | CpG island 304 | ||
Tssr11856 | 1 | 48 | - | TSS region | transcription start site region 11856 | |
Tssr11857 | 1 | 26 | - | TSS region | transcription start site region 11857 | |
Tssr11858 | 1 | 34 | - | TSS region | transcription start site region 11858 | |
Gm11578 | 1 | 458 | - | pseudogene | predicted gene 11578 | |
Gm38388 | 1 | 1429 | - | lncRNA gene | predicted gene, 38388 | |
Tssr6929 | 1 | 3 | + | TSS region | transcription start site region 6929 | |
Tssr6930 | 1 | 17 | + | TSS region | transcription start site region 6930 | |
Tssr6931 | 1 | 7 | + | TSS region | transcription start site region 6931 | |
Gm23762 | 1 | 105 | - | miRNA gene | predicted gene, 23762 | |
Gm11577 | 1 | 1065 | + | pseudogene | predicted gene 11577 | |
D1Mit126 | 1 | 116 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 126 | ||
Tssr6932 | 1 | 7 | + | TSS region | transcription start site region 6932 | |
Eif4a-ps4 | 1 | 1217 | + | pseudogene | eukaryotic translation initiation factor 4A, pseudogene 4 | |
Tssr6933 | 1 | 39 | + | TSS region | transcription start site region 6933 | |
Tssr6934 | 1 | 15 | + | TSS region | transcription start site region 6934 | |
Tssr6935 | 1 | 18 | + | TSS region | transcription start site region 6935 | |
Tssr6936 | 1 | 8 | + | TSS region | transcription start site region 6936 | |
Tssr6937 | 1 | 4 | + | TSS region | transcription start site region 6937 | |
Tssr6938 | 1 | 60 | + | TSS region | transcription start site region 6938 | |
Cd28 | 1 | 26971 | + | protein coding gene | CD28 antigen | |
Tssr6939 | 1 | 48 | + | TSS region | transcription start site region 6939 | |
Tssr6940 | 1 | 11 | + | TSS region | transcription start site region 6940 | |
Tssr6941 | 1 | 3 | + | TSS region | transcription start site region 6941 | |
Tssr6942 | 1 | 4 | + | TSS region | transcription start site region 6942 | |
Cpgi305 | 1 | 202 | CpG island | CpG island 305 | ||
Tssr6943 | 1 | 4 | + | TSS region | transcription start site region 6943 | |
Tssr6944 | 1 | 3 | + | TSS region | transcription start site region 6944 | |
Gm11579 | 1 | 5169 | - | lincRNA gene | predicted gene 11579 | |
Tssr6945 | 1 | 5 | + | TSS region | transcription start site region 6945 | |
2310016D23Rik | 1 | 24947 | + | lincRNA gene | RIKEN cDNA 2310016D23 gene | |
Gm37198 | 1 | 2109 | + | unclassified gene | predicted gene, 37198 | |
Tssr11859 | 1 | 49 | - | TSS region | transcription start site region 11859 | |
Tssr11860 | 1 | 3 | - | TSS region | transcription start site region 11860 | |
Gm11609 | 1 | 588 | + | pseudogene | predicted gene 11609 | |
Tssr6946 | 1 | 16 | + | TSS region | transcription start site region 6946 | |
Gm11581 | 1 | 826 | + | pseudogene | predicted gene 11581 | |
Tssr6947 | 1 | 2 | + | TSS region | transcription start site region 6947 | |
Tssr6948 | 1 | 12 | + | TSS region | transcription start site region 6948 | |
D1Mit249 | 1 | 147 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 249 | ||
Gm38137 | 1 | 1400 | + | lncRNA gene | predicted gene, 38137 | |
Gm39650 | 1 | 445 | + | lncRNA gene | predicted gene, 39650 | |
Tssr11861 | 1 | 15 | - | TSS region | transcription start site region 11861 | |
Tssr6949 | 1 | 10 | + | TSS region | transcription start site region 6949 | |
Tssr6950 | 1 | 25 | + | TSS region | transcription start site region 6950 | |
Tssr6951 | 1 | 15 | + | TSS region | transcription start site region 6951 | |
Tssr11862 | 1 | 37 | - | TSS region | transcription start site region 11862 | |
Tssr6952 | 1 | 1 | + | TSS region | transcription start site region 6952 | |
Rpl18-ps1 | 1 | 524 | + | pseudogene | ribosomal protein L18, pseudogene 1 | |
Tssr11863 | 1 | 4 | - | TSS region | transcription start site region 11863 | |
Tssr6953 | 1 | 8 | + | TSS region | transcription start site region 6953 | |
Tssr11864 | 1 | 4 | - | TSS region | transcription start site region 11864 | |
Tssr6954 | 1 | 40 | + | TSS region | transcription start site region 6954 | |
Ctla4 | 1 | 6807 | + | protein coding gene | cytotoxic T-lymphocyte-associated protein 4 | |
Tssr6955 | 1 | 17 | + | TSS region | transcription start site region 6955 | |
Tssr6956 | 1 | 11 | + | TSS region | transcription start site region 6956 | |
Tssr6957 | 1 | 43 | + | TSS region | transcription start site region 6957 | |
Tssr6958 | 1 | 6 | + | TSS region | transcription start site region 6958 | |
Tssr11865 | 1 | 25 | - | TSS region | transcription start site region 11865 | |
Tssr11866 | 1 | 44 | - | TSS region | transcription start site region 11866 | |
Tssr6959 | 1 | 5 | + | TSS region | transcription start site region 6959 | |
Tssr6960 | 1 | 13 | + | TSS region | transcription start site region 6960 | |
Tssr6961 | 1 | 10 | + | TSS region | transcription start site region 6961 | |
Tssr6962 | 1 | 7 | + | TSS region | transcription start site region 6962 | |
Tssr11867 | 1 | 13 | - | TSS region | transcription start site region 11867 | |
Tssr6963 | 1 | 6 | + | TSS region | transcription start site region 6963 | |
Tssr6964 | 1 | 14 | + | TSS region | transcription start site region 6964 | |
Tssr6965 | 1 | 36 | + | TSS region | transcription start site region 6965 | |
Cpgi306 | 1 | 181 | CpG island | CpG island 306 | ||
Tssr6966 | 1 | 16 | + | TSS region | transcription start site region 6966 | |
Gm34649 | 1 | 23785 | + | lncRNA gene | predicted gene, 34649 | |
Gm11582 | 1 | 235 | - | pseudogene | predicted gene 11582 | |
Tssr11868 | 1 | 25 | - | TSS region | transcription start site region 11868 | |
Tssr6967 | 1 | 39 | + | TSS region | transcription start site region 6967 | |
Icos | 1 | 22393 | + | protein coding gene | inducible T cell co-stimulator | |
Tssr6968 | 1 | 17 | + | TSS region | transcription start site region 6968 | |
Gm37039 | 1 | 2484 | + | unclassified gene | predicted gene, 37039 | |
Tssr6969 | 1 | 5 | + | TSS region | transcription start site region 6969 | |
Tssr6970 | 1 | 2 | + | TSS region | transcription start site region 6970 | |
Rpl17-ps1 | 1 | 551 | + | pseudogene | ribosomal protein L17, pseudogene 1 | |
Gm11590 | 1 | 2626 | - | pseudogene | predicted gene 11590 | |
D1Mit301 | 1 | 99 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 301 | ||
Gm11591 | 1 | 701 | - | pseudogene | predicted gene 11591 | |
Cpgi307 | 1 | 164 | CpG island | CpG island 307 | ||
D1Mit176 | 1 | 110 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 176 | ||
Gm28083 | 1 | 6223 | - | lincRNA gene | predicted gene 28083 | |
Gm11587 | 1 | 5837 | + | lincRNA gene | predicted gene 11587 | |
9530026F06Rik | 1 | 17472 | + | lincRNA gene | RIKEN cDNA 9530026F06 gene | |
Gm11588 | 1 | 29374 | + | lincRNA gene | predicted gene 11588 | |
Gm25839 | 1 | 102 | + | snRNA gene | predicted gene, 25839 | |
Gm28449 | 1 | 1077 | + | lincRNA gene | predicted gene 28449 | |
Gm36943 | 1 | 281 | + | unclassified gene | predicted gene, 36943 | |
Gm28094 | 1 | 389 | + | pseudogene | predicted gene 28094 | |
4930587A21Rik | 1 | 4206 | - | lincRNA gene | RIKEN cDNA 4930587A21 gene | |
Cpgi308 | 1 | 1054 | CpG island | CpG island 308 | ||
Tssr6971 | 1 | 22 | + | TSS region | transcription start site region 6971 | |
Pard3b | 1 | 1003460 | + | protein coding gene | par-3 family cell polarity regulator beta | |
Tssr6972 | 1 | 22 | + | TSS region | transcription start site region 6972 | |
Tssr95 | 1 | 11 | + | TSS region | transcription start site region 95 | |
Tssr6973 | 1 | 13 | + | TSS region | transcription start site region 6973 | |
Tssr6974 | 1 | 20 | + | TSS region | transcription start site region 6974 | |
Gm37205 | 1 | 2735 | + | unclassified gene | predicted gene, 37205 | |
Tssr6975 | 1 | 1 | + | TSS region | transcription start site region 6975 | |
Gm38012 | 1 | 3028 | + | unclassified gene | predicted gene, 38012 | |
Gm38278 | 1 | 1364 | + | unclassified gene | predicted gene, 38278 | |
Pard3bos1 | 1 | 84125 | - | antisense lncRNA gene | par-3 family cell polarity regulator beta, opposite strand 1 | |
Gm38075 | 1 | 919 | + | unclassified gene | predicted gene, 38075 | |
D1Mit326 | 1 | 126 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 326 | ||
Tssr6976 | 1 | 4 | + | TSS region | transcription start site region 6976 | |
Tssr11869 | 1 | 7 | - | TSS region | transcription start site region 11869 | |
Tssr11870 | 1 | 13 | - | TSS region | transcription start site region 11870 | |
Tssr6977 | 1 | 4 | + | TSS region | transcription start site region 6977 | |
Tssr6978 | 1 | 4 | + | TSS region | transcription start site region 6978 | |
Gm29640 | 1 | 277 | - | pseudogene | predicted gene 29640 | |
Gm29641 | 1 | 258 | - | pseudogene | predicted gene 29641 | |
Pard3bos2 | 1 | 4914 | - | antisense lncRNA gene | par-3 family cell polarity regulator beta, opposite strand 2 | |
Gm38351 | 1 | 2517 | + | unclassified gene | predicted gene, 38351 | |
Pard3bos3 | 1 | 42536 | - | antisense lncRNA gene | par-3 family cell polarity regulator beta, opposite strand 3 | |
Tssr6979 | 1 | 16 | + | TSS region | transcription start site region 6979 | |
Gm34881 | 1 | 12741 | - | lncRNA gene | predicted gene, 34881 | |
Tssr6980 | 1 | 5 | + | TSS region | transcription start site region 6980 | |
Gm29084 | 1 | 1451 | - | antisense lncRNA gene | predicted gene 29084 | |
Gm11600 | 1 | 1093 | - | pseudogene | predicted gene 11600 | |
Tssr6981 | 1 | 1 | + | TSS region | transcription start site region 6981 | |
Gm11599 | 1 | 877 | + | pseudogene | predicted gene 11599 | |
Cpgi309 | 1 | 1155 | CpG island | CpG island 309 | ||
Tssr11871 | 1 | 5 | - | TSS region | transcription start site region 11871 | |
Tssr6982 | 1 | 10 | + | TSS region | transcription start site region 6982 | |
Nrp2 | 1 | 115375 | + | protein coding gene | neuropilin 2 | |
Tssr6983 | 1 | 19 | + | TSS region | transcription start site region 6983 | |
Tssr6984 | 1 | 17 | + | TSS region | transcription start site region 6984 | |
Tssr6985 | 1 | 11 | + | TSS region | transcription start site region 6985 | |
Tssr6986 | 1 | 15 | + | TSS region | transcription start site region 6986 | |
Tssr6987 | 1 | 35 | + | TSS region | transcription start site region 6987 | |
Tssr11872 | 1 | 51 | - | TSS region | transcription start site region 11872 | |
Tssr6988 | 1 | 18 | + | TSS region | transcription start site region 6988 |