Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:59608241-59738625

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm973 1 59516264 to 59636417 120153 + protein coding gene predicted gene 973
Gm33833 1 59612058 to 59619439 7381 - lncRNA gene predicted gene, 33833
Tssr6883 1 59619398 to 59619415 17 + TSS region transcription start site region 6883
Gm24545 1 59626580 to 59626664 84 + unclassified non-coding RNA gene predicted gene, 24545
Sumo1 1 59639434 to 59670834 31400 - protein coding gene small ubiquitin-like modifier 1
9330123L03Rik 1 59643995 to 59651014 7019 unclassified non-coding RNA gene RIKEN cDNA 9330123L03 gene
D430013B06Rik 1 59646200 to 59648071 1871 - unclassified gene RIKEN cDNA D430013B06 gene
Tssr11830 1 59662439 to 59662441 2 - TSS region transcription start site region 11830
Tssr11831 1 59668973 to 59668977 4 - TSS region transcription start site region 11831
Cpgi294 1 59670051 to 59671107 1056 CpG island CpG island 294
Tssr11832 1 59670380 to 59670394 14 - TSS region transcription start site region 11832
Tssr11833 1 59670776 to 59670810 34 - TSS region transcription start site region 11833
Tssr11834 1 59670812 to 59670830 18 - TSS region transcription start site region 11834
Tssr6884 1 59670823 to 59670857 34 + TSS region transcription start site region 6884
Gm29596 1 59673241 to 59673625 384 + pseudogene predicted gene 29596
Tssr11835 1 59684802 to 59684831 29 - TSS region transcription start site region 11835
Cpgi295 1 59684871 to 59685384 513 CpG island CpG island 295
Tssr6885 1 59684949 to 59685023 74 + TSS region transcription start site region 6885
Nop58 1 59684951 to 59711510 26559 + protein coding gene NOP58 ribonucleoprotein
Tssr6886 1 59689544 to 59689548 4 + TSS region transcription start site region 6886
Snord70 1 59691958 to 59692010 52 + snoRNA gene small nucleolar RNA, C/D box 70
Gm26293 1 59692509 to 59692592 83 + snoRNA gene predicted gene, 26293
Tssr11836 1 59697745 to 59697779 34 - TSS region transcription start site region 11836
Tssr6887 1 59698060 to 59698075 15 + TSS region transcription start site region 6887
Gm26287 1 59704258 to 59704338 80 + snoRNA gene predicted gene, 26287
Snord11 1 59704808 to 59704870 62 + snoRNA gene small nucleolar RNA, C/D box 11
Tssr6888 1 59705642 to 59705655 13 + TSS region transcription start site region 6888
Tssr6889 1 59705659 to 59705693 34 + TSS region transcription start site region 6889
Tssr6890 1 59706999 to 59707038 39 + TSS region transcription start site region 6890
Tssr6891 1 59709000 to 59709040 40 + TSS region transcription start site region 6891
Tssr6892 1 59710517 to 59710549 32 + TSS region transcription start site region 6892
Tssr11837 1 59710544 to 59710620 76 - TSS region transcription start site region 11837