Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:59482995-59587221

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi292 1 59481809 to 59484600 2791 CpG island CpG island 292
Fzd7 1 59482424 to 59486955 4531 + protein coding gene frizzled class receptor 7
Gm26813 1 59488480 to 59492605 4125 - lincRNA gene predicted gene, 26813
2310061L18Rik 1 59515795 to 59516630 835 unclassified gene RIKEN cDNA 2310061L18 gene
Cpgi293 1 59516070 to 59516334 264 CpG island CpG island 293
Gm973 1 59516264 to 59636417 120153 + protein coding gene predicted gene 973
Gm39649 1 59532995 to 59537221 4226 - lncRNA gene predicted gene, 39649
1700122D07Rik 1 59534811 to 59537229 2418 - antisense lncRNA gene RIKEN cDNA 1700122D07 gene
Tssr11824 1 59537195 to 59537231 36 - TSS region transcription start site region 11824
Gm28411 1 59542117 to 59548804 6687 - antisense lncRNA gene predicted gene 28411
Tssr6876 1 59544139 to 59544153 14 + TSS region transcription start site region 6876
Tssr6877 1 59544191 to 59544245 54 + TSS region transcription start site region 6877
Tssr11825 1 59548779 to 59548784 5 - TSS region transcription start site region 11825
Tssr11826 1 59548790 to 59548802 12 - TSS region transcription start site region 11826
Tssr6878 1 59548836 to 59548846 10 + TSS region transcription start site region 6878
Tssr6879 1 59548862 to 59548871 9 + TSS region transcription start site region 6879
Tssr94 1 59548874 to 59548880 6 + TSS region transcription start site region 94
Tssr6880 1 59551028 to 59551040 12 + TSS region transcription start site region 6880
Tssr11827 1 59551117 to 59551133 16 - TSS region transcription start site region 11827
Tssr11828 1 59551135 to 59551146 11 - TSS region transcription start site region 11828
Gm39648 1 59582482 to 59596208 13726 - lncRNA gene predicted gene, 39648