Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:59155273-59475288

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mpp4 1 59120935 to 59163389 42454 - protein coding gene membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
Gm29017 1 59151047 to 59169320 18273 + antisense lncRNA gene predicted gene 29017
Gm19125 1 59155607 to 59156957 1350 + pseudogene predicted gene, 19125
Tssr11818 1 59161559 to 59161593 34 - TSS region transcription start site region 11818
Tssr11819 1 59161594 to 59161628 34 - TSS region transcription start site region 11819
Als2 1 59162926 to 59237231 74305 - protein coding gene alsin Rho guanine nucleotide exchange factor
Tssr6862 1 59172086 to 59172113 27 + TSS region transcription start site region 6862
Wbcc1 1 59220508 to 59220508 0 QTL white blood cell count 1
D1Mit161 1 59223201 to 59223312 111 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 161
Cpgi290 1 59236795 to 59237571 776 CpG island CpG island 290
Tssr11820 1 59237175 to 59237256 81 - TSS region transcription start site region 11820
Gm33667 1 59237378 to 59239022 1644 + lncRNA gene predicted gene, 33667
Tssr6863 1 59237468 to 59237493 25 + TSS region transcription start site region 6863
Cdk15 1 59256861 to 59352612 95751 + protein coding gene cyclin-dependent kinase 15
D1Mit279 1 59277790 to 59277962 172 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 279
Tssr6864 1 59298920 to 59298939 19 + TSS region transcription start site region 6864
Tssr6865 1 59315273 to 59315288 15 + TSS region transcription start site region 6865
Tssr11821 1 59316106 to 59316128 22 - TSS region transcription start site region 11821
Tssr11822 1 59316134 to 59316145 11 - TSS region transcription start site region 11822
Tssr11823 1 59377359 to 59377371 12 - TSS region transcription start site region 11823
Gm29016 1 59378930 to 59392299 13369 + lincRNA gene predicted gene 29016
Gm33724 1 59393246 to 59418927 25681 - lncRNA gene predicted gene, 33724
Tssr6866 1 59432172 to 59432176 4 + TSS region transcription start site region 6866
Gm37737 1 59447865 to 59449502 1637 - unclassified gene predicted gene, 37737
Tssr6867 1 59448851 to 59448856 5 + TSS region transcription start site region 6867
Tssr6868 1 59449274 to 59449281 7 + TSS region transcription start site region 6868
Gm33774 1 59455328 to 59458627 3299 - lncRNA gene predicted gene, 33774
D1Mit302 1 59466834 to 59466973 139 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 302