Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:59062926-59337231

34 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm25502	1	59070988 to 59071118	130	+	snoRNA gene	predicted gene, 25502
Tssr11812	1	59084487 to 59084535	48	-	TSS region	transcription start site region 11812
Cpgi288	1	59094836 to 59095048	212		CpG island	CpG island 288
Tssr11813	1	59094885 to 59094903	18	-	TSS region	transcription start site region 11813
Tssr11814	1	59094914 to 59094920	6	-	TSS region	transcription start site region 11814
Tmem237	1	59100590 to 59120408	19818	-	protein coding gene	transmembrane protein 237
Cpgi289	1	59119646 to 59120614	968		CpG island	CpG island 289
Tssr11815	1	59119748 to 59119795	47	-	TSS region	transcription start site region 11815
Tssr6858	1	59119822 to 59119861	39	+	TSS region	transcription start site region 6858
G730003C15Rik	1	59119833 to 59122141	2308	+	antisense lncRNA gene	RIKEN cDNA G730003C15 gene
Tssr11816	1	59120079 to 59120135	56	-	TSS region	transcription start site region 11816
Mpp4	1	59120935 to 59163389	42454	-	protein coding gene	membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
Tssr6859	1	59150889 to 59150905	16	+	TSS region	transcription start site region 6859
Tssr6860	1	59150914 to 59150921	7	+	TSS region	transcription start site region 6860
Tssr6861	1	59150931 to 59150959	28	+	TSS region	transcription start site region 6861
Gm29017	1	59151047 to 59169320	18273	+	antisense lncRNA gene	predicted gene 29017
Tssr11817	1	59151679 to 59151686	7	-	TSS region	transcription start site region 11817
Gm19125	1	59155607 to 59156957	1350	+	pseudogene	predicted gene, 19125
Tssr11818	1	59161559 to 59161593	34	-	TSS region	transcription start site region 11818
Tssr11819	1	59161594 to 59161628	34	-	TSS region	transcription start site region 11819
Als2	1	59162926 to 59237231	74305	-	protein coding gene	alsin Rho guanine nucleotide exchange factor
Tssr6862	1	59172086 to 59172113	27	+	TSS region	transcription start site region 6862
Wbcc1	1	59220508 to 59220508	0		QTL	white blood cell count 1
D1Mit161	1	59223201 to 59223312	111		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 161
Cpgi290	1	59236795 to 59237571	776		CpG island	CpG island 290
Tssr11820	1	59237175 to 59237256	81	-	TSS region	transcription start site region 11820
Gm33667	1	59237378 to 59239022	1644	+	lncRNA gene	predicted gene, 33667
Tssr6863	1	59237468 to 59237493	25	+	TSS region	transcription start site region 6863
Cdk15	1	59256861 to 59352612	95751	+	protein coding gene	cyclin-dependent kinase 15
D1Mit279	1	59277790 to 59277962	172		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 279
Tssr6864	1	59298920 to 59298939	19	+	TSS region	transcription start site region 6864
Tssr6865	1	59315273 to 59315288	15	+	TSS region	transcription start site region 6865
Tssr11821	1	59316106 to 59316128	22	-	TSS region	transcription start site region 11821
Tssr11822	1	59316134 to 59316145	11	-	TSS region	transcription start site region 11822