Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:59000889-59300905

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
C2cd6 1 58997123 to 59003539 6416 - protein coding gene C2 calcium dependent domain containing 6
Tssr11805 1 59003535 to 59003540 5 - TSS region transcription start site region 11805
Tssr11806 1 59014070 to 59014075 5 - TSS region transcription start site region 11806
Tssr11807 1 59014086 to 59014093 7 - TSS region transcription start site region 11807
Tssr11808 1 59014096 to 59014104 8 - TSS region transcription start site region 11808
Tssr11809 1 59014106 to 59014115 9 - TSS region transcription start site region 11809
Tssr11810 1 59014121 to 59014151 30 - TSS region transcription start site region 11810
Tssr6857 1 59014190 to 59014209 19 + TSS region transcription start site region 6857
Gm29018 1 59035934 to 59038188 2254 + antisense lncRNA gene predicted gene 29018
Tssr11811 1 59042564 to 59042569 5 - TSS region transcription start site region 11811
Gm25502 1 59070988 to 59071118 130 + snoRNA gene predicted gene, 25502
Tssr11812 1 59084487 to 59084535 48 - TSS region transcription start site region 11812
Cpgi288 1 59094836 to 59095048 212 CpG island CpG island 288
Tssr11813 1 59094885 to 59094903 18 - TSS region transcription start site region 11813
Tssr11814 1 59094914 to 59094920 6 - TSS region transcription start site region 11814
Tmem237 1 59100590 to 59120408 19818 - protein coding gene transmembrane protein 237
Cpgi289 1 59119646 to 59120614 968 CpG island CpG island 289
Tssr11815 1 59119748 to 59119795 47 - TSS region transcription start site region 11815
Tssr6858 1 59119822 to 59119861 39 + TSS region transcription start site region 6858
G730003C15Rik 1 59119833 to 59122141 2308 + antisense lncRNA gene RIKEN cDNA G730003C15 gene
Tssr11816 1 59120079 to 59120135 56 - TSS region transcription start site region 11816
Mpp4 1 59120935 to 59163389 42454 - protein coding gene membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
Tssr6859 1 59150889 to 59150905 16 + TSS region transcription start site region 6859
Tssr6860 1 59150914 to 59150921 7 + TSS region transcription start site region 6860
Tssr6861 1 59150931 to 59150959 28 + TSS region transcription start site region 6861
Gm29017 1 59151047 to 59169320 18273 + antisense lncRNA gene predicted gene 29017
Tssr11817 1 59151679 to 59151686 7 - TSS region transcription start site region 11817
Gm19125 1 59155607 to 59156957 1350 + pseudogene predicted gene, 19125
Tssr11818 1 59161559 to 59161593 34 - TSS region transcription start site region 11818
Tssr11819 1 59161594 to 59161628 34 - TSS region transcription start site region 11819
Als2 1 59162926 to 59237231 74305 - protein coding gene alsin Rho guanine nucleotide exchange factor
Tssr6862 1 59172086 to 59172113 27 + TSS region transcription start site region 6862
Wbcc1 1 59220508 to 59220508 0 QTL white blood cell count 1
D1Mit161 1 59223201 to 59223312 111 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 161
Cpgi290 1 59236795 to 59237571 776 CpG island CpG island 290
Tssr11820 1 59237175 to 59237256 81 - TSS region transcription start site region 11820
Gm33667 1 59237378 to 59239022 1644 + lncRNA gene predicted gene, 33667
Tssr6863 1 59237468 to 59237493 25 + TSS region transcription start site region 6863
Cdk15 1 59256861 to 59352612 95751 + protein coding gene cyclin-dependent kinase 15
D1Mit279 1 59277790 to 59277962 172 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 279
Tssr6864 1 59298920 to 59298939 19 + TSS region transcription start site region 6864