Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:58722051-58892158

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cflar 1 58711508 to 58758884 47376 + protein coding gene CASP8 and FADD-like apoptosis regulator
Tssr6799 1 58722729 to 58722747 18 + TSS region transcription start site region 6799
Tssr11790 1 58725887 to 58725898 11 - TSS region transcription start site region 11790
Tssr6800 1 58726016 to 58726063 47 + TSS region transcription start site region 6800
Tssr6801 1 58726064 to 58726075 11 + TSS region transcription start site region 6801
Tssr6802 1 58726095 to 58726106 11 + TSS region transcription start site region 6802
Tssr6803 1 58726164 to 58726178 14 + TSS region transcription start site region 6803
Tssr6804 1 58726196 to 58726222 26 + TSS region transcription start site region 6804
Tssr11791 1 58727092 to 58727112 20 - TSS region transcription start site region 11791
Tssr6805 1 58727250 to 58727261 11 + TSS region transcription start site region 6805
Tssr6806 1 58728615 to 58728626 11 + TSS region transcription start site region 6806
Tssr6807 1 58728652 to 58728698 46 + TSS region transcription start site region 6807
Tssr6808 1 58728713 to 58728724 11 + TSS region transcription start site region 6808
Tssr6809 1 58729557 to 58729559 2 + TSS region transcription start site region 6809
Cpgi285 1 58737003 to 58737174 171 CpG island CpG island 285
Tssr6810 1 58738432 to 58738452 20 + TSS region transcription start site region 6810
Tssr6811 1 58738652 to 58738673 21 + TSS region transcription start site region 6811
Tssr6812 1 58738974 to 58738997 23 + TSS region transcription start site region 6812
Tssr6813 1 58743547 to 58743550 3 + TSS region transcription start site region 6813
Tssr6814 1 58745144 to 58745152 8 + TSS region transcription start site region 6814
Tssr6815 1 58749393 to 58749419 26 + TSS region transcription start site region 6815
Tssr6816 1 58753694 to 58753699 5 + TSS region transcription start site region 6816
Tssr6817 1 58754074 to 58754121 47 + TSS region transcription start site region 6817
Tssr6818 1 58754742 to 58754758 16 + TSS region transcription start site region 6818
Tssr6819 1 58754802 to 58754821 19 + TSS region transcription start site region 6819
Tssr6820 1 58754881 to 58754896 15 + TSS region transcription start site region 6820
Tssr6821 1 58754915 to 58754926 11 + TSS region transcription start site region 6821
Tssr6822 1 58754982 to 58754993 11 + TSS region transcription start site region 6822
Tssr6823 1 58755081 to 58755092 11 + TSS region transcription start site region 6823
Tssr6824 1 58755115 to 58755127 12 + TSS region transcription start site region 6824
Tssr6825 1 58755222 to 58755234 12 + TSS region transcription start site region 6825
Tssr6826 1 58755323 to 58755340 17 + TSS region transcription start site region 6826
Tssr6827 1 58755957 to 58755968 11 + TSS region transcription start site region 6827
Tssr6828 1 58756266 to 58756281 15 + TSS region transcription start site region 6828
Tssr6829 1 58756298 to 58756313 15 + TSS region transcription start site region 6829
Tssr6830 1 58756345 to 58756401 56 + TSS region transcription start site region 6830
Tssr6831 1 58756806 to 58756823 17 + TSS region transcription start site region 6831
Tssr6832 1 58758379 to 58758403 24 + TSS region transcription start site region 6832
Gm39646 1 58767583 to 58791874 24291 - lncRNA gene predicted gene, 39646
Gm3841 1 58785209 to 58785659 450 + pseudogene predicted gene 3841
Tssr6833 1 58795371 to 58795447 76 + TSS region transcription start site region 6833
Casp8 1 58795374 to 58847503 52129 + protein coding gene caspase 8
Tssr6834 1 58795462 to 58795559 97 + TSS region transcription start site region 6834
Cpgi286 1 58795511 to 58795936 425 CpG island CpG island 286
Tssr6835 1 58795587 to 58795601 14 + TSS region transcription start site region 6835
Tssr6836 1 58795618 to 58795639 21 + TSS region transcription start site region 6836
Tssr6837 1 58795656 to 58795667 11 + TSS region transcription start site region 6837
Tssr6838 1 58795671 to 58795682 11 + TSS region transcription start site region 6838
Tssr6839 1 58795692 to 58795710 18 + TSS region transcription start site region 6839
Tssr6840 1 58795931 to 58795945 14 + TSS region transcription start site region 6840
Tssr6841 1 58796324 to 58796336 12 + TSS region transcription start site region 6841
Gm37760 1 58797783 to 58801623 3840 + unclassified gene predicted gene, 37760
Tssr6842 1 58802492 to 58802517 25 + TSS region transcription start site region 6842
Tssr6843 1 58802537 to 58802542 5 + TSS region transcription start site region 6843
Tssr6844 1 58802577 to 58802580 3 + TSS region transcription start site region 6844
Tssr6845 1 58802594 to 58802637 43 + TSS region transcription start site region 6845
Tssr6846 1 58802649 to 58802656 7 + TSS region transcription start site region 6846
Tssr11792 1 58804782 to 58804792 10 - TSS region transcription start site region 11792
D1Mit414 1 58807051 to 58807158 107 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 414
Tssr6847 1 58831585 to 58831632 47 + TSS region transcription start site region 6847
Tssr6848 1 58846803 to 58846818 15 + TSS region transcription start site region 6848
Tssr6849 1 58846870 to 58846888 18 + TSS region transcription start site region 6849
Tssr6850 1 58846914 to 58846935 21 + TSS region transcription start site region 6850
Gm28802 1 58850085 to 58892792 42707 - pseudogene predicted gene 28802
D1Mit75b 1 58891199 to 58891369 170 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 75b