MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 1:58420156-58487276

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Clk1	1	58411988 to 58424088	12100	-	protein coding gene	CDC-like kinase 1
Tssr11777	1	58420315 to 58420331	16	-	TSS region	transcription start site region 11777
Tssr11778	1	58422844 to 58422849	5	-	TSS region	transcription start site region 11778
Cpgi278	1	58423327 to 58424273	946		CpG island	CpG island 278
Tssr11779	1	58424007 to 58424028	21	-	TSS region	transcription start site region 11779
Tssr11780	1	58424042 to 58424064	22	-	TSS region	transcription start site region 11780
Ppil3	1	58430994 to 58445486	14492	-	protein coding gene	peptidylprolyl isomerase (cyclophilin)-like 3
Tssr6776	1	58431398 to 58431400	2	+	TSS region	transcription start site region 6776
Cpgi279	1	58445066 to 58445703	637		CpG island	CpG island 279
Nif3l1	1	58445156 to 58462276	17120	+	protein coding gene	Ngg1 interacting factor 3-like 1 (S. pombe)
Tssr11781	1	58445161 to 58445202	41	-	TSS region	transcription start site region 11781
Tssr6777	1	58445259 to 58445307	48	+	TSS region	transcription start site region 6777
Tssr11782	1	58445406 to 58445491	85	-	TSS region	transcription start site region 11782
Tssr6778	1	58445510 to 58445528	18	+	TSS region	transcription start site region 6778
Tssr6779	1	58445531 to 58445618	87	+	TSS region	transcription start site region 6779
Tssr92	1	58449526 to 58449532	6	+	TSS region	transcription start site region 92
Orc2	1	58462771 to 58505109	42338	-	protein coding gene	origin recognition complex, subunit 2
Gm23966	1	58466515 to 58466621	106	-	snRNA gene	predicted gene, 23966