Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Col4a1m1 | 1 | 37396613 | QTL | collagen, type IV, alpha 1 modifier 1 | ||
Hbnr1 | 1 | 32723002 | QTL | Heligmosomoides bakeri nematode resistance 1 | ||
Shm3 | 1 | 18759979 | QTL | sperm head morphology 3 | ||
Idd5.1 | 1 | 5218606 | QTL | insulin dependent diabetes susceptibility 5.1 | ||
Sgo2a | 1 | 29928 | + | protein coding gene | shugoshin 2A | |
Aox1 | 1 | 76482 | + | protein coding gene | aldehyde oxidase 1 | |
Tssr6756 | 1 | 19 | + | TSS region | transcription start site region 6756 | |
Tssr6757 | 1 | 13 | + | TSS region | transcription start site region 6757 | |
Tssr11773 | 1 | 3 | - | TSS region | transcription start site region 11773 | |
Aox3 | 1 | 87317 | + | protein coding gene | aldehyde oxidase 3 | |
Tssr6758 | 1 | 18 | + | TSS region | transcription start site region 6758 | |
Tssr6759 | 1 | 43 | + | TSS region | transcription start site region 6759 | |
Gm39643 | 1 | 25336 | - | lncRNA gene | predicted gene, 39643 | |
Tssr6760 | 1 | 14 | + | TSS region | transcription start site region 6760 | |
Tssr6761 | 1 | 23 | + | TSS region | transcription start site region 6761 | |
Gm24548 | 1 | 107 | - | snoRNA gene | predicted gene, 24548 | |
D1Mit376 | 1 | 131 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 376 | ||
D1Mit376.1 | 1 | 112 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 376.1 | ||
D1Mit531 | 1 | 108 | DNA segment | DNA Segment, Chr 1, Massachusetts Institute of Technology 531 | ||
Tssr6762 | 1 | 1 | + | TSS region | transcription start site region 6762 | |
Aox4 | 1 | 58200 | + | protein coding gene | aldehyde oxidase 4 | |
Tssr6763 | 1 | 14 | + | TSS region | transcription start site region 6763 | |
Bswt | 1 | 5650145 | heritable phenotypic marker | belly spot with white toes | ||
D1Mit214 | 1 | 147 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 214 | ||
Thypr2 | 1 | 147 | QTL | thymocyte proliferative response 2 | ||
D1Mit5.2 | 1 | 175 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 5.2 | ||
Tssr6764 | 1 | 2 | + | TSS region | transcription start site region 6764 | |
Aox2 | 1 | 100938 | + | protein coding gene | aldehyde oxidase 2 | |
Gm15759 | 1 | 26014 | - | antisense lncRNA gene | predicted gene 15759 | |
Gm37607 | 1 | 2622 | - | unclassified gene | predicted gene, 37607 | |
Gm6860 | 1 | 223 | - | pseudogene | predicted gene 6860 | |
Tssr6765 | 1 | 6 | + | TSS region | transcription start site region 6765 | |
Cpgi277 | 1 | 1375 | CpG island | CpG island 277 | ||
Tssr11774 | 1 | 23 | - | TSS region | transcription start site region 11774 | |
Tssr6766 | 1 | 16 | + | TSS region | transcription start site region 6766 | |
Tssr6767 | 1 | 20 | + | TSS region | transcription start site region 6767 | |
Tssr11775 | 1 | 21 | - | TSS region | transcription start site region 11775 | |
Tssr6768 | 1 | 28 | + | TSS region | transcription start site region 6768 | |
Bzw1 | 1 | 14218 | + | protein coding gene | basic leucine zipper and W2 domains 1 | |
Tssr6769 | 1 | 48 | + | TSS region | transcription start site region 6769 | |
Tssr91 | 1 | 7 | - | TSS region | transcription start site region 91 | |
Tssr6770 | 1 | 11 | + | TSS region | transcription start site region 6770 | |
Tssr6771 | 1 | 13 | + | TSS region | transcription start site region 6771 | |
Tssr6772 | 1 | 21 | + | TSS region | transcription start site region 6772 | |
Tssr6773 | 1 | 9 | + | TSS region | transcription start site region 6773 | |
Tssr6774 | 1 | 25 | + | TSS region | transcription start site region 6774 | |
Tssr6775 | 1 | 37 | + | TSS region | transcription start site region 6775 | |
Clk1 | 1 | 12100 | - | protein coding gene | CDC-like kinase 1 | |
Tssr11776 | 1 | 11 | - | TSS region | transcription start site region 11776 | |
Tssr11777 | 1 | 16 | - | TSS region | transcription start site region 11777 | |
Tssr11778 | 1 | 5 | - | TSS region | transcription start site region 11778 | |
Cpgi278 | 1 | 946 | CpG island | CpG island 278 | ||
Tssr11779 | 1 | 21 | - | TSS region | transcription start site region 11779 | |
Tssr11780 | 1 | 22 | - | TSS region | transcription start site region 11780 | |
Ppil3 | 1 | 14492 | - | protein coding gene | peptidylprolyl isomerase (cyclophilin)-like 3 | |
Tssr6776 | 1 | 2 | + | TSS region | transcription start site region 6776 | |
Cpgi279 | 1 | 637 | CpG island | CpG island 279 | ||
Nif3l1 | 1 | 17120 | + | protein coding gene | Ngg1 interacting factor 3-like 1 (S. pombe) | |
Tssr11781 | 1 | 41 | - | TSS region | transcription start site region 11781 | |
Tssr6777 | 1 | 48 | + | TSS region | transcription start site region 6777 | |
Tssr11782 | 1 | 85 | - | TSS region | transcription start site region 11782 | |
Tssr6778 | 1 | 18 | + | TSS region | transcription start site region 6778 | |
Tssr6779 | 1 | 87 | + | TSS region | transcription start site region 6779 | |
Tssr92 | 1 | 6 | + | TSS region | transcription start site region 92 | |
Orc2 | 1 | 42338 | - | protein coding gene | origin recognition complex, subunit 2 | |
Gm23966 | 1 | 106 | - | snRNA gene | predicted gene, 23966 | |
Cpgi280 | 1 | 810 | CpG island | CpG island 280 | ||
Tssr11783 | 1 | 23 | - | TSS region | transcription start site region 11783 | |
Tssr11784 | 1 | 19 | - | TSS region | transcription start site region 11784 | |
Tssr6780 | 1 | 27 | + | TSS region | transcription start site region 6780 | |
Gm15834 | 1 | 18082 | + | lincRNA gene | predicted gene 15834 | |
Fam126b | 1 | 63517 | - | protein coding gene | family with sequence similarity 126, member B | |
Tssr11785 | 1 | 5 | - | TSS region | transcription start site region 11785 | |
D1Mit324 | 1 | 237 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 324 | ||
Cpgi281 | 1 | 989 | CpG island | CpG island 281 | ||
Tssr11786 | 1 | 78 | - | TSS region | transcription start site region 11786 | |
Tssr6781 | 1 | 20 | + | TSS region | transcription start site region 6781 | |
Ndufb3 | 1 | 9567 | + | protein coding gene | NADH:ubiquinone oxidoreductase subunit B3 | |
Tssr6782 | 1 | 41 | + | TSS region | transcription start site region 6782 | |
Tssr6783 | 1 | 34 | + | TSS region | transcription start site region 6783 | |
Tssr93 | 1 | 13 | + | TSS region | transcription start site region 93 | |
Gm29389 | 1 | 351 | - | pseudogene | predicted gene 29389 | |
Gm18802 | 1 | 587 | + | pseudogene | predicted gene, 18802 | |
Cbx3-ps7 | 1 | 551 | + | pseudogene | chromobox 3, pseudogene 7 | |
Cpgi282 | 1 | 491 | CpG island | CpG island 282 | ||
Tssr6784 | 1 | 38 | + | TSS region | transcription start site region 6784 | |
Gm20257 | 1 | 3190 | + | pseudogene | predicted gene, 20257 | |
Flacc1 | 1 | 39083 | - | protein coding gene | flagellum associated containing coiled-coil domains 1 | |
D1Mit75a | 1 | 189 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 75a | ||
Tssr11787 | 1 | 20 | - | TSS region | transcription start site region 11787 | |
Gm28803 | 1 | 1677 | + | pseudogene | predicted gene 28803 | |
Cpgi283 | 1 | 552 | CpG island | CpG island 283 | ||
Tssr6785 | 1 | 11 | + | TSS region | transcription start site region 6785 | |
Tssr6786 | 1 | 35 | + | TSS region | transcription start site region 6786 | |
Cflar | 1 | 47376 | + | protein coding gene | CASP8 and FADD-like apoptosis regulator | |
Tssr6787 | 1 | 28 | + | TSS region | transcription start site region 6787 | |
Tssr11788 | 1 | 23 | - | TSS region | transcription start site region 11788 | |
Tssr6788 | 1 | 38 | + | TSS region | transcription start site region 6788 | |
Tssr6789 | 1 | 13 | + | TSS region | transcription start site region 6789 | |
Tssr6790 | 1 | 73 | + | TSS region | transcription start site region 6790 | |
Cpgi284 | 1 | 369 | CpG island | CpG island 284 | ||
Tssr6791 | 1 | 12 | + | TSS region | transcription start site region 6791 | |
Tssr6792 | 1 | 3 | + | TSS region | transcription start site region 6792 | |
Tssr6793 | 1 | 11 | + | TSS region | transcription start site region 6793 | |
Tssr6794 | 1 | 36 | + | TSS region | transcription start site region 6794 | |
Tssr6795 | 1 | 7 | + | TSS region | transcription start site region 6795 | |
Tssr6796 | 1 | 13 | + | TSS region | transcription start site region 6796 | |
Tssr6797 | 1 | 3 | + | TSS region | transcription start site region 6797 | |
Tssr6798 | 1 | 19 | + | TSS region | transcription start site region 6798 | |
Tssr11789 | 1 | 12 | - | TSS region | transcription start site region 11789 | |
Tssr6799 | 1 | 18 | + | TSS region | transcription start site region 6799 | |
Tssr11790 | 1 | 11 | - | TSS region | transcription start site region 11790 | |
Tssr6800 | 1 | 47 | + | TSS region | transcription start site region 6800 | |
Tssr6801 | 1 | 11 | + | TSS region | transcription start site region 6801 | |
Tssr6802 | 1 | 11 | + | TSS region | transcription start site region 6802 | |
Tssr6803 | 1 | 14 | + | TSS region | transcription start site region 6803 | |
Tssr6804 | 1 | 26 | + | TSS region | transcription start site region 6804 | |
Tssr11791 | 1 | 20 | - | TSS region | transcription start site region 11791 | |
Tssr6805 | 1 | 11 | + | TSS region | transcription start site region 6805 | |
Tssr6806 | 1 | 11 | + | TSS region | transcription start site region 6806 | |
Tssr6807 | 1 | 46 | + | TSS region | transcription start site region 6807 | |
Tssr6808 | 1 | 11 | + | TSS region | transcription start site region 6808 | |
Tssr6809 | 1 | 2 | + | TSS region | transcription start site region 6809 | |
Cpgi285 | 1 | 171 | CpG island | CpG island 285 | ||
Tssr6810 | 1 | 20 | + | TSS region | transcription start site region 6810 | |
Tssr6811 | 1 | 21 | + | TSS region | transcription start site region 6811 | |
Tssr6812 | 1 | 23 | + | TSS region | transcription start site region 6812 | |
Tssr6813 | 1 | 3 | + | TSS region | transcription start site region 6813 | |
Tssr6814 | 1 | 8 | + | TSS region | transcription start site region 6814 | |
Tssr6815 | 1 | 26 | + | TSS region | transcription start site region 6815 | |
Tssr6816 | 1 | 5 | + | TSS region | transcription start site region 6816 | |
Tssr6817 | 1 | 47 | + | TSS region | transcription start site region 6817 | |
Tssr6818 | 1 | 16 | + | TSS region | transcription start site region 6818 | |
Tssr6819 | 1 | 19 | + | TSS region | transcription start site region 6819 | |
Tssr6820 | 1 | 15 | + | TSS region | transcription start site region 6820 | |
Tssr6821 | 1 | 11 | + | TSS region | transcription start site region 6821 | |
Tssr6822 | 1 | 11 | + | TSS region | transcription start site region 6822 | |
Tssr6823 | 1 | 11 | + | TSS region | transcription start site region 6823 | |
Tssr6824 | 1 | 12 | + | TSS region | transcription start site region 6824 | |
Tssr6825 | 1 | 12 | + | TSS region | transcription start site region 6825 | |
Tssr6826 | 1 | 17 | + | TSS region | transcription start site region 6826 | |
Tssr6827 | 1 | 11 | + | TSS region | transcription start site region 6827 | |
Tssr6828 | 1 | 15 | + | TSS region | transcription start site region 6828 | |
Tssr6829 | 1 | 15 | + | TSS region | transcription start site region 6829 | |
Tssr6830 | 1 | 56 | + | TSS region | transcription start site region 6830 | |
Tssr6831 | 1 | 17 | + | TSS region | transcription start site region 6831 | |
Tssr6832 | 1 | 24 | + | TSS region | transcription start site region 6832 | |
Gm39646 | 1 | 24291 | - | lncRNA gene | predicted gene, 39646 | |
Gm3841 | 1 | 450 | + | pseudogene | predicted gene 3841 | |
Tssr6833 | 1 | 76 | + | TSS region | transcription start site region 6833 | |
Casp8 | 1 | 52129 | + | protein coding gene | caspase 8 | |
Tssr6834 | 1 | 97 | + | TSS region | transcription start site region 6834 | |
Cpgi286 | 1 | 425 | CpG island | CpG island 286 | ||
Tssr6835 | 1 | 14 | + | TSS region | transcription start site region 6835 | |
Tssr6836 | 1 | 21 | + | TSS region | transcription start site region 6836 | |
Tssr6837 | 1 | 11 | + | TSS region | transcription start site region 6837 | |
Tssr6838 | 1 | 11 | + | TSS region | transcription start site region 6838 | |
Tssr6839 | 1 | 18 | + | TSS region | transcription start site region 6839 | |
Tssr6840 | 1 | 14 | + | TSS region | transcription start site region 6840 | |
Tssr6841 | 1 | 12 | + | TSS region | transcription start site region 6841 | |
Gm37760 | 1 | 3840 | + | unclassified gene | predicted gene, 37760 | |
Tssr6842 | 1 | 25 | + | TSS region | transcription start site region 6842 | |
Tssr6843 | 1 | 5 | + | TSS region | transcription start site region 6843 | |
Tssr6844 | 1 | 3 | + | TSS region | transcription start site region 6844 | |
Tssr6845 | 1 | 43 | + | TSS region | transcription start site region 6845 | |
Tssr6846 | 1 | 7 | + | TSS region | transcription start site region 6846 | |
Tssr11792 | 1 | 10 | - | TSS region | transcription start site region 11792 | |
D1Mit414 | 1 | 107 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 414 | ||
Tssr6847 | 1 | 47 | + | TSS region | transcription start site region 6847 | |
Tssr6848 | 1 | 15 | + | TSS region | transcription start site region 6848 | |
Tssr6849 | 1 | 18 | + | TSS region | transcription start site region 6849 | |
Tssr6850 | 1 | 21 | + | TSS region | transcription start site region 6850 | |
Gm28802 | 1 | 42707 | - | pseudogene | predicted gene 28802 | |
D1Mit75b | 1 | 170 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 75b | ||
Trak2 | 1 | 72981 | - | protein coding gene | trafficking protein, kinesin binding 2 | |
Tssr11793 | 1 | 11 | - | TSS region | transcription start site region 11793 | |
Tssr11794 | 1 | 4 | - | TSS region | transcription start site region 11794 | |
Tssr11795 | 1 | 4 | - | TSS region | transcription start site region 11795 | |
Cpgi287 | 1 | 1340 | CpG island | CpG island 287 | ||
Tssr11796 | 1 | 14 | - | TSS region | transcription start site region 11796 | |
Tssr11797 | 1 | 13 | - | TSS region | transcription start site region 11797 | |
Tssr11798 | 1 | 19 | - | TSS region | transcription start site region 11798 | |
Tssr11799 | 1 | 26 | - | TSS region | transcription start site region 11799 | |
Tssr11800 | 1 | 11 | - | TSS region | transcription start site region 11800 | |
Tssr11801 | 1 | 19 | - | TSS region | transcription start site region 11801 | |
Tssr11802 | 1 | 11 | - | TSS region | transcription start site region 11802 | |
Tssr11803 | 1 | 10 | - | TSS region | transcription start site region 11803 | |
Tssr6851 | 1 | 61 | + | TSS region | transcription start site region 6851 | |
Stradb | 1 | 21599 | + | protein coding gene | STE20-related kinase adaptor beta | |
Tssr6852 | 1 | 19 | + | TSS region | transcription start site region 6852 | |
Tssr6853 | 1 | 28 | + | TSS region | transcription start site region 6853 | |
Tssr6854 | 1 | 23 | + | TSS region | transcription start site region 6854 | |
Tssr6855 | 1 | 11 | + | TSS region | transcription start site region 6855 | |
Tssr6856 | 1 | 15 | + | TSS region | transcription start site region 6856 | |
Tssr11804 | 1 | 5 | - | TSS region | transcription start site region 11804 | |
C2cd6 | 1 | 6416 | - | protein coding gene | C2 calcium dependent domain containing 6 | |
Tssr11805 | 1 | 5 | - | TSS region | transcription start site region 11805 | |
Tssr11806 | 1 | 5 | - | TSS region | transcription start site region 11806 | |
Tssr11807 | 1 | 7 | - | TSS region | transcription start site region 11807 | |
Tssr11808 | 1 | 8 | - | TSS region | transcription start site region 11808 |