Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:55432016-56742029

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plcl1 1 55405946 to 55754285 348339 + protein coding gene phospholipase C-like 1
Gm38056 1 55440904 to 55445930 5026 + unclassified gene predicted gene, 38056
Gm6644 1 55444074 to 55445024 950 - pseudogene predicted gene 6644
Tssr6725 1 55450098 to 55450111 13 + TSS region transcription start site region 6725
Tssr6726 1 55450188 to 55450220 32 + TSS region transcription start site region 6726
Tssr6727 1 55450299 to 55450389 90 + TSS region transcription start site region 6727
Tssr6728 1 55456720 to 55456737 17 + TSS region transcription start site region 6728
Gm39642 1 55502042 to 55506499 4457 - lncRNA gene predicted gene, 39642
Gm37382 1 55559460 to 55561055 1595 + unclassified gene predicted gene, 37382
Tssr6729 1 55606065 to 55606069 4 + TSS region transcription start site region 6729
Tssr11732 1 55764643 to 55764646 3 - TSS region transcription start site region 11732
Tssr6730 1 55796376 to 55796425 49 + TSS region transcription start site region 6730
Gm32949 1 55888972 to 55917219 28247 + lncRNA gene predicted gene, 32949
Tssr6731 1 55892069 to 55892107 38 + TSS region transcription start site region 6731
9130227L01Rik 1 55931241 to 55972098 40857 + lincRNA gene RIKEN cDNA 9130227L01 gene
Gm36986 1 55960404 to 55960756 352 - unclassified gene predicted gene, 36986
Tssr6732 1 56018954 to 56018993 39 + TSS region transcription start site region 6732
1700003I22Rik 1 56018978 to 56020203 1225 + lincRNA gene RIKEN cDNA 1700003I22 gene
Tssr6733 1 56019874 to 56019879 5 + TSS region transcription start site region 6733
Tssr6734 1 56087016 to 56087029 13 + TSS region transcription start site region 6734
D1Mit529 1 56184815 to 56185005 190 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 529
Tssr6735 1 56451363 to 56451373 10 + TSS region transcription start site region 6735
Gm28900 1 56451407 to 56451562 155 + pseudogene predicted gene 28900
Gm28240 1 56531824 to 56533876 2052 + lincRNA gene predicted gene 28240
Hsfy2 1 56636044 to 56637435 1391 - protein coding gene heat shock transcription factor, Y-linked 2
Tssr11733 1 56637408 to 56637415 7 - TSS region transcription start site region 11733
Tssr11734 1 56637425 to 56637429 4 - TSS region transcription start site region 11734
Tssr11735 1 56637430 to 56637449 19 - TSS region transcription start site region 11735
Tssr11736 1 56637455 to 56637460 5 - TSS region transcription start site region 11736
Tssr11737 1 56637461 to 56637480 19 - TSS region transcription start site region 11737
D1Mit530 1 56673681 to 56673795 114 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 530