Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:55090747-55231053

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hspe1 1 55088148 to 55091317 3169 + protein coding gene heat shock protein 1 (chaperonin 10)
Gm5147 1 55120080 to 55120873 793 - pseudogene predicted gene 5147
Gm16581 1 55127297 to 55128287 990 + pseudogene predicted gene 16581
Cpgi262 1 55130974 to 55131955 981 CpG island CpG island 262
Tssr11715 1 55131038 to 55131053 15 - TSS region transcription start site region 11715
Tssr6714 1 55131095 to 55131108 13 + TSS region transcription start site region 6714
Tssr6715 1 55131237 to 55131249 12 + TSS region transcription start site region 6715
Mob4 1 55131245 to 55154899 23654 + protein coding gene MOB family member 4, phocein
Tssr6716 1 55131253 to 55131302 49 + TSS region transcription start site region 6716
Tssr6717 1 55131317 to 55131331 14 + TSS region transcription start site region 6717
Tssr11716 1 55131623 to 55131654 31 - TSS region transcription start site region 11716
Tssr6718 1 55147628 to 55147633 5 + TSS region transcription start site region 6718
Gm6822 1 55160747 to 55161053 306 - pseudogene predicted pseudogene 6822
Rftn2 1 55170159 to 55226782 56623 - protein coding gene raftlin family member 2
Tssr6719 1 55204903 to 55204912 9 + TSS region transcription start site region 6719
Tssr11717 1 55215530 to 55215574 44 - TSS region transcription start site region 11717
Tssr11718 1 55226460 to 55226521 61 - TSS region transcription start site region 11718
Tssr11719 1 55226522 to 55226541 19 - TSS region transcription start site region 11719
Tssr6720 1 55226611 to 55226622 11 + TSS region transcription start site region 6720
Gm10561 1 55226661 to 55235534 8873 + antisense lncRNA gene predicted gene 10561
Tssr11720 1 55226742 to 55226764 22 - TSS region transcription start site region 11720
Tssr11721 1 55226768 to 55226813 45 - TSS region transcription start site region 11721