Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:55070159-55326782

37 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Coq10b	1	55052770 to 55072702	19932	+	protein coding gene	coenzyme Q10B
Hspd1	1	55077834 to 55088217	10383	-	protein coding gene	heat shock protein 1 (chaperonin)
Cpgi261	1	55087067 to 55088740	1673		CpG island	CpG island 261
Tssr11711	1	55087825 to 55087885	60	-	TSS region	transcription start site region 11711
Tssr6712	1	55087951 to 55087994	43	+	TSS region	transcription start site region 6712
Tssr11712	1	55088030 to 55088102	72	-	TSS region	transcription start site region 11712
Tssr11713	1	55088103 to 55088117	14	-	TSS region	transcription start site region 11713
Hspe1	1	55088148 to 55091317	3169	+	protein coding gene	heat shock protein 1 (chaperonin 10)
Tssr11714	1	55088156 to 55088180	24	-	TSS region	transcription start site region 11714
Tssr6713	1	55088306 to 55088352	46	+	TSS region	transcription start site region 6713
Gm5147	1	55120080 to 55120873	793	-	pseudogene	predicted gene 5147
Gm16581	1	55127297 to 55128287	990	+	pseudogene	predicted gene 16581
Cpgi262	1	55130974 to 55131955	981		CpG island	CpG island 262
Tssr11715	1	55131038 to 55131053	15	-	TSS region	transcription start site region 11715
Tssr6714	1	55131095 to 55131108	13	+	TSS region	transcription start site region 6714
Tssr6715	1	55131237 to 55131249	12	+	TSS region	transcription start site region 6715
Mob4	1	55131245 to 55154899	23654	+	protein coding gene	MOB family member 4, phocein
Tssr6716	1	55131253 to 55131302	49	+	TSS region	transcription start site region 6716
Tssr6717	1	55131317 to 55131331	14	+	TSS region	transcription start site region 6717
Tssr11716	1	55131623 to 55131654	31	-	TSS region	transcription start site region 11716
Tssr6718	1	55147628 to 55147633	5	+	TSS region	transcription start site region 6718
Gm6822	1	55160747 to 55161053	306	-	pseudogene	predicted pseudogene 6822
Rftn2	1	55170159 to 55226782	56623	-	protein coding gene	raftlin family member 2
Tssr6719	1	55204903 to 55204912	9	+	TSS region	transcription start site region 6719
Tssr11717	1	55215530 to 55215574	44	-	TSS region	transcription start site region 11717
Tssr11718	1	55226460 to 55226521	61	-	TSS region	transcription start site region 11718
Tssr11719	1	55226522 to 55226541	19	-	TSS region	transcription start site region 11719
Tssr6720	1	55226611 to 55226622	11	+	TSS region	transcription start site region 6720
Gm10561	1	55226661 to 55235534	8873	+	antisense lncRNA gene	predicted gene 10561
Tssr11720	1	55226742 to 55226764	22	-	TSS region	transcription start site region 11720
Tssr11721	1	55226768 to 55226813	45	-	TSS region	transcription start site region 11721
Cpgi263	1	55236911 to 55238367	1456		CpG island	CpG island 263
Tssr11722	1	55237037 to 55237045	8	-	TSS region	transcription start site region 11722
Mars2	1	55237177 to 55240058	2881	+	protein coding gene	methionine-tRNA synthetase 2 (mitochondrial)
Tssr6721	1	55237191 to 55237255	64	+	TSS region	transcription start site region 6721
Boll	1	55248658 to 55363469	114811	-	protein coding gene	boule homolog, RNA binding protein
Tssr11723	1	55248678 to 55248683	5	-	TSS region	transcription start site region 11723